Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso1g02312 | ATGTTCTTCAATACACAATTCACAATGTCAACCACCTGTGAAGGAAAGAGTTCATGGCCCGAGCTTGTAGGCGTGAGGGGAGATGCAGCGGCTAGTACAATTGAGAGAGAGAATACACGGGTCGATGCTATTGTGGTTGTAGATGGAAGGGATAATGTTACAGGTGATTTCCGATGCGATCGTGTGTGGGTGTGGGTGAACTCTAATGGGGTGGTCATTCGAACTCCATTCATTGGCTAA | 240 | 47.08 | MFFNTQFTMSTTCEGKSSWPELVGVRGDAAASTIERENTRVDAIVVVDGRDNVTGDFRCDRVWVWVNSNGVVIRTPFIG | 79 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso1g02312 | 79 | SUPERFAMILY | CI-2 family of serine protease inhibitors | 12 | 79 | IPR036354 | - | |
| Fso1g02312 | 79 | PANTHER | PROTEIN, PUTATIVE, EXPRESSED-RELATED | 13 | 79 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Fso1g02312 | 79 | ProSitePatterns | Potato inhibitor I family signature. | 19 | 30 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) | |
| Fso1g02312 | 79 | Gene3D | Trypsin Inhibitor V, subunit A | 9 | 78 | - | - | |
| Fso1g02312 | 79 | Pfam | Potato inhibitor I family | 16 | 79 | IPR000864 | GO:0004867(InterPro)|GO:0009611(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso1g02312 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fso | Fso-Chr1:64929401 | Fso1g02317 | Fso-Chr1:65003720 | dispersed | |
| Fso | Fso-Chr1:64920645 | Fso1g02312 | Fso-Chr1:64929401 | tandem | |
| Fso | Fso-Chr1:64929401 | Fso1g02313 | Fso-Chr1:64935987 | tandem |