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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00048 ATGAACTCTACATCAAGATCACTTGTTTTAATGAACTATTTCCCAGATACGCCTGATATTACCCAAGCTTGCAAGCACAATTCAGGCCCATTAATAAGCATGATGAACACATGCCATGATGTTGCTGGTAAACGGTGGCCTAATTTCATTGCTGTTGACTTTTACAAGAGGAGTGATGGTGGGGGTGCACCAGCAGCTGTAGATATGGCTAACGGTCAGCTGGTTTGTGGTTGTAACACCATTGCAGCATGCAGGCCAAACATGACCTTTGGAGCTTGTAACCTCCCAGAGGCTGGGGCTGCTCCAACTCCAATTTCAGCATTAAAAACCTCGGGGAGCACTGGTGATCGACCGGGTCAACTTGGATGGTTGTTTGGGTCAGGTTTGATTGCTATAACCTTGTGTTTTTAA 411 45.74 MNSTSRSLVLMNYFPDTPDITQACKHNSGPLISMMNTCHDVAGKRWPNFIAVDFYKRSDGGGAPAAVDMANGQLVCGCNTIAACRPNMTFGACNLPEAGAAPTPISALKTSGSTGDRPGQLGWLFGSGLIAITLCF 136
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00048 136 PANTHER UNCHARACTERIZED 4 84 IPR051057 GO:0008081(PANTHER)
Fso2g00048 136 SUPERFAMILY PLC-like phosphodiesterases 4 75 IPR017946 GO:0006629(InterPro)|GO:0008081(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00048 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
95377 Fso13g01607 Fso2g00048
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr10:73993300 Fso2g00048 Fso-Chr2:596853 dispersed
Fso Fso-Chr13:55266056 Fso2g00048 Fso-Chr2:596853 wgd