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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00052 ATGAGTTCATTTATCAACTTCAAGAACTATGGTGATACATCACAACCAGAGCTCAATTGCAGCAAACAAATGGTGGCGAATTCACCGTTGACCCGACAATCTTCCATCTACTCGTTGACTTTTGATGAATTGCAAAGCACTTTAGGTGGTAGTGGGAAAGATTTTGGATCAATGAACATGGATGAACTTTTGAAGAACATTTGGAATGCTGAAGAAACACAAGCAATTGCATCGACTTCGAGCTTAGGGATCAATGGAAATGCCCCGAATAATGGGAACATTCAAAGACAAGGGTCATTGACTTTACCAAGAACACTTAGCAGAAAAACAGTTGATGAAGTTTGGCGGGAGTTGCTTGTAAGTAGTAGTAATAATGGAGTCAAAGATGGGGACTTGATTGGTCAAACGAATTTACAACAAGAAGAAAGAGAGCCAACATTAGGTGAGATGACACTTGAGGATTTCTTGCTGAAAGCAGGGGTAGTAAAGGAAGATCACCAAATTCAAACAAACCCGCGACCCGTTATACCTCAAAACGGGTCGTATTTCGGGGATGTTTCACAACCGAATGTCGAAAACAGTAGTTTCATATTCGGGTTTCAAAACCCAAATCAGAATAACGGGTTTAATGGGCCAACGGTTAGCCGAATCACCGAGGCTAAAACAGGTGTGACCCTGCACCCAAAACCACAGCCCCAGTCCCAGCCCCAGCCCATTTTTCCCAAACAAGCTGCTTTGGACTTCACGGCACCGTTGACAGGTCAACTGGCTAGCCCGGGGGCTAAAATGGGGAAGTTTGAGCAACCGGTGGTTAAGACTAGTGTGGTTCAAGCTAGTGACATAGAGAATGGAGTGATGAACATGAAAACACTTGGGGGTGTTTCGGTTAACTCTCCACGGAATTTGATCCCGAAAAGTAATTTGGATTCGACTCCATCACCCCCGTTTTATGCGTTTGGTGAAGGCGATGTACGTGGCCCGAAACGCAGTGGGACTTTAGAGAAAGTGGTGGAGAGAAGGCGGAGAAGGATGATCAAGAACAGAGAGTCAGCTGCACGTTCTCGTGCCCGAAAGCAGGCGTATACCTTGGAATTGGAAGCAGAAGTTGCAAAACTTAAAGAAATCAACCATGAGTTGCTTAAAAAACAGGCAAAGATCATGGAGATGCAGAATAATCAGGTAGTGGATAAGTTGAAACGGCCTTGGGGAAGCAAAAGATTATGCTTGAGAAGAACATTGACTGGACCTTGGTAG 1254 44.5 MSSFINFKNYGDTSQPELNCSKQMVANSPLTRQSSIYSLTFDELQSTLGGSGKDFGSMNMDELLKNIWNAEETQAIASTSSLGINGNAPNNGNIQRQGSLTLPRTLSRKTVDEVWRELLVSSSNNGVKDGDLIGQTNLQQEEREPTLGEMTLEDFLLKAGVVKEDHQIQTNPRPVIPQNGSYFGDVSQPNVENSSFIFGFQNPNQNNGFNGPTVSRITEAKTGVTLHPKPQPQSQPQPIFPKQAALDFTAPLTGQLASPGAKMGKFEQPVVKTSVVQASDIENGVMNMKTLGGVSVNSPRNLIPKSNLDSTPSPPFYAFGEGDVRGPKRSGTLEKVVERRRRRMIKNRESAARSRARKQAYTLELEAEVAKLKEINHELLKKQAKIMEMQNNQVVDKLKRPWGSKRLCLRRTLTGPW 417
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00052 417 Coils Coil 358 392 - -
Fso2g00052 417 Pfam bZIP transcription factor 339 389 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Fso2g00052 417 SUPERFAMILY Leucine zipper domain 339 387 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Fso2g00052 417 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 5 337 394 - -
Fso2g00052 417 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 342 357 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Fso2g00052 417 CDD bZIP-plant-BZIP46 344 390 - -
Fso2g00052 417 Gene3D - 337 394 - -
Fso2g00052 417 SMART brlzneu 335 400 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Fso2g00052 417 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 32 415 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Fso2g00052 417 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 337 388 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00052 K14432 ABA responsive element binding factor
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr10:77775300 Fso2g00052 Fso-Chr2:632859 dispersed
Fso Fso-Chr14:16939335 Fso2g00052 Fso-Chr2:632859 dispersed
Fso Fso-Chr2:632859 Fso5g00454 Fso-Chr5:7894020 dispersed
Fso Fso-Chr2:632859 Fso4g01007 Fso-Chr4:14849764 transposed
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Fso1g00089 . 37 124 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 38.202 1.28e-16 69.7
Fso1g00090 . 18 144 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 35.338 3.29e-18 73.9
Fso1g00627 ACH 21 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 58.383 3.48e-119 350.0
Fso1g00685 . 121 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 28.75 5.35e-22 91.3
Fso1g00686 . 121 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 31.081 3.54e-23 94.4
Fso1g00691 . 120 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 28.807 9.70e-23 93.6
Fso2g00052 . 1 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 47.178 1.28e-99 300.0
Fso2g00288 ACH 1 312 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 56.688 1.32e-102 301.0
Fso2g00656 . 146 313 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G44080 50.0 2.69e-36 128.0
Fso2g00702 ACH 211 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 55.556 5.11e-24 99.4
Fso2g02739 WGDA 1 143 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 51.034 2.86e-49 153.0
Fso2g02824 . 114 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 25.229 1.88e-14 69.7
Fso2g03068 WGDA 1 381 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 48.418 3.75e-105 313.0
Fso3g02136 WGDA 1 153 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 67.089 1.92e-52 162.0
Fso3g02457 WGDA 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 61.284 0.0 593.0
Fso4g00515 . 1 376 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 59.788 8.53e-141 404.0
Fso4g00546 WGDA 43 277 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 47.638 4.46e-60 192.0
Fso4g00852 ACH 1 292 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G42380 43.218 4.61e-71 219.0
Fso4g00873 WGDA 121 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 30.047 1.46e-17 79.3
Fso4g01007 . 1 392 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G49720 39.906 2.57e-73 232.0
Fso5g00454 ACH,WGDA 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 51.905 7.16e-109 325.0
Fso5g00595 ACH,WGDA 9 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 43.429 1.99e-34 117.0
Fso5g01624 . 15 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 53.135 1.44e-88 264.0
Fso5g01747 . 23 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06839 56.278 9.92e-165 472.0
Fso5g01933 . 1 440 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G36270 47.257 1.80e-98 300.0
Fso6g00269 WGDA 1 143 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G62420 57.241 2.72e-53 163.0
Fso6g00419 WGDA 1 382 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G46270 49.395 4.87e-106 315.0
Fso6g00679 WGDA 29 376 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 60.795 3.36e-138 398.0
Fso6g00774 . 12 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 53.374 3.95e-97 288.0
Fso6g02097 . 17 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 49.669 4.21e-40 131.0
Fso7g00267 WGDA 24 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 54.375 3.78e-45 146.0
Fso7g01193 . 76 258 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 60.513 8.87e-71 214.0
Fso7g01327 . 1 553 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 54.902 0.0 523.0
Fso8g00640 ACH,WGDA 21 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 48.571 1.96e-40 132.0
Fso9g00147 . 23 337 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 45.946 2.89e-68 214.0
Fso9g01486 WGDA 1 153 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G11260 72.549 1.92e-60 182.0
Fso9g01672 WGDA 1 481 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G08320 59.127 0.0 553.0
Fso10g00087 . 133 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 39.49 1.42e-13 64.3
Fso10g00668 ACH 1 367 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 53.59 1.03e-111 328.0
Fso10g02403 . 21 161 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 53.333 3.24e-39 130.0
Fso10g02615 . 46 517 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G38900 49.701 3.50e-124 372.0
Fso10g02647 . 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G28770 39.326 4.06e-69 220.0
Fso10g02719 WGDA 62 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 40.789 2.96e-37 130.0
Fso10g03007 ACH,WGDA 28 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 56.643 1.46e-44 144.0
Fso10g03172 ACH,WGDA 195 269 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G37730 50.667 1.70e-14 68.2
Fso10g03295 ACH,WGDA 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 55.263 4.05e-110 322.0
Fso10g03470 ACH 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 52.542 1.09e-110 329.0
Fso10g03566 ACH 20 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G34590 52.778 1.09e-39 130.0
Fso11g00644 WGDA 62 276 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G24800 47.826 9.05e-54 175.0
Fso11g01029 WGDA 114 309 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 25.114 1.45e-13 67.8
Fso11g01196 ACH 9 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 48.765 3.20e-44 142.0
Fso11g01547 ACH 211 300 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 51.111 1.37e-21 92.4
Fso12g00264 WGDA 4 146 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G38800 48.299 2.14e-36 121.0
Fso12g00405 . 95 171 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35040 54.545 3.23e-19 79.0
Fso12g00846 . 1 307 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 51.402 2.39e-88 265.0
Fso12g01553 . 23 720 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40950 47.651 5.21e-163 484.0
Fso12g01589 . 200 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 68.939 8.87e-54 170.0
Fso12g01647 . 5 297 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G56850 50.974 6.70e-84 253.0
Fso13g01682 ACH,WGDA 9 166 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 50.0 8.43e-43 138.0
Fso14g00850 ACH 1 365 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 53.018 9.26e-107 315.0
Fso14g01263 ACH,WGDA 21 416 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G45249 53.207 1.17e-115 342.0
Fso14g01337 ACH,WGDA 24 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 49.65 1.83e-38 127.0
Fso14g01550 . 15 338 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G43700 45.906 7.27e-76 235.0
Fso15g01188 . 16 160 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G18160 37.241 1.31e-24 91.7
Fso15g01190 . 16 160 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G18160 36.552 2.86e-24 90.9
Fso15g01439 ACH 123 213 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 46.154 5.66e-20 81.6
Fso15g01578 ACH 23 167 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G30530 55.28 4.68e-47 150.0
Fso15g02177 WGDA 36 400 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G35530 57.682 4.51e-129 374.0
Fso15g02600 . 1 246 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G16770 52.672 3.81e-82 244.0
Fso15g02818 . 1 452 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G68640 59.006 1.27e-166 475.0
Fso16g00449 . 213 318 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 40.187 8.87e-16 74.7
Fso16g00885 ACH,WGDA 101 213 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 40.708 5.99e-22 87.4
Fso16g00957 ACH 1 315 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 45.312 8.60e-73 224.0
Fso16g01607 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 75.227 5.46e-178 494.0
Fso16g01680 . 27 370 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 67.778 1.55e-143 414.0
Fso17g00015 . 69 270 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G03970 52.683 2.73e-57 182.0
Fso17g00145 . 121 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 35.329 1.53e-16 72.8
Fso17g01066 WGDA 61 285 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G35900 42.478 4.39e-33 119.0
Fso17g01226 WGDA 10 159 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G13600 44.937 4.44e-35 120.0
Fso17g01332 ACH,WGDA 176 304 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G37730 41.667 2.09e-18 78.6
Fso17g01401 ACH,WGDA 1 302 Basic region leucine zipper (bZIP) Transcription Factor gene family AT4G36730 54.599 1.94e-108 317.0
Fso18g00022 . 155 292 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G42990 50.714 8.38e-21 87.0
Fso18g00712 . 1 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G12250 76.737 0.0 502.0
Fso18g02087 WGDA 101 213 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G22850 38.938 6.79e-22 86.3
Fso18g02943 ACH 1 349 Basic region leucine zipper (bZIP) Transcription Factor gene family AT2G40620 53.887 5.21e-107 316.0
Fso10001679.1g00001 . 21 339 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G06070 68.168 2.66e-152 436.0
Fso10001015.1g00008 . 64 187 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G51960 39.062 8.99e-18 74.7
Fso10001761.1g00001 . 32 330 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06950 68.106 6.70e-144 411.0
Fso10000219.1g00001 . 37 164 Basic region leucine zipper (bZIP) Transcription Factor gene family AT1G75390 44.615 3.64e-29 103.0
Fso10000218.1g00006 . 112 217 Basic region leucine zipper (bZIP) Transcription Factor gene family AT5G06960 31.193 1.03e-13 64.3
Fso10000186.1g00002 . 1 312 Basic region leucine zipper (bZIP) Transcription Factor gene family AT3G58120 56.688 1.32e-102 301.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Fso bZIP_1 1.1e-11 CL0018 TF bZIP