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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00053 ATGGCGGAACCAAAACAATCACATCAGTTTCTCTCCAAACAACGCTCGTGGTCACCGGACATCCACCGCGACATCGAGTGGCAGAAGCTGAAGAACAACCAGCAACGCCGCTACCGCCACCGCCGGAGCAAGAGCATTGACGGTGTTAAGGAAGTTGAAGTCACTGATGATGATGTGAAGGAGCTGAAAGCGTGCTTTGATTTAGGTTTCGGTTTCGGTTTTGATTTCTCTAGTGATTTGGATCCGAAGCTTTCGCAGGCTTTTCCGGCGCTCGAACTTTACGCGGCGGTTAATCGGCAGTATAATAGTAGGATTCTGTCGAGATCTTCGTCGTTGAGTTCGGATTCGTCGTCGAGTTCTTCGTGTTCAACTACTGCTATCATTGATCCAAGTGATGATCCGAAGAAGGTGAAGACGAAACTGAAGCAATGGGCGCAACTGGTTTCTTGTTCAGTTCTGGAAGCTTCTACTCAGCTAGCCAATAACAAAAATCCTGCAGAGTAG 504 48.21 MAEPKQSHQFLSKQRSWSPDIHRDIEWQKLKNNQQRRYRHRRSKSIDGVKEVEVTDDDVKELKACFDLGFGFGFDFSSDLDPKLSQAFPALELYAAVNRQYNSRILSRSSSLSSDSSSSSSCSTTAIIDPSDDPKKVKTKLKQWAQLVSCSVLEASTQLANNKNPAE 167
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00053 167 MobiDBLite consensus disorder prediction 109 128 - -
Fso2g00053 167 Pfam Protein of unknown function (DUF1685) 54 115 IPR012881 -
Fso2g00053 167 PANTHER OSJNBA0071G03.3 PROTEIN 8 153 - -
Fso2g00053 167 MobiDBLite consensus disorder prediction 109 135 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00053 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
95114 Fso11g01365 Fso2g00053
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr11:15549189 Fso2g00053 Fso-Chr2:643673 dispersed
Fso Fso-Chr2:643673 Fso9g01829 Fso-Chr9:46373766 dispersed
Fso Fso-Chr2:643673 Fso6g02170 Fso-Chr6:51314715 wgd