AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00067 ATGGCCACCGCAAAGTCTACCGGCCGTACGATCTCTCAACAAGCTTTCGACGAAATGGTAAAAGAGAACATCGAAGATTTAGGTATGGAGCCAATGGAAGCCCTAAGCGACGCAATCGAAACGCTAACACTTCAAGGCGTAGATCTCTCCGGTATCGTTACGGATACACTCCCCGGAGAAACTAATCCTGTGATCCAATCGCTTGATCGACTGAAACAGTTGCAGTGTTCGGATTGGAGCGATGAGGCGGTGGTAGATGAGGTTCTAGGGTTGTTGGATGGTTTGATTAGAATGTGTCGTGGTGAGGGGTCTGGAAGTGGTGCAATTGCTGCGAGAAATGGTGGTGTGGAGTTGATGTGTTCTGTTTGCTCAAAAGTTGGTGATGGTGGCCGTGATTCAGTGCTTGTGTCGGCTTTGGATGCATTGGCTGTGTTTGTTCATGATCTTCAGAGTACAGAAGCTTTTAGGCAAAATGGAGGACCAAAAATGTTGGTTGAGATCCTAACCAAAGAAACTCAAAATGTGAAAATCTTGAACAGTGGTTTTTCTGTTGTTGCGGCTGCTTCAACTGGTAATGAGGTTATTAAGGAATCCTTTGTCGAGTTACACATAGATGAATTAATGGTTTCAATCATGAAGAGACATACAAAGGGGAACATTCCCAGTTTATATGATGCCATTAGAGTGCTTTTGGCTGCTGATGATAATCGTGTAGTGGCTTCACAAGTTTATGGCTATGCTCGACAATTTGCCAAAACTGGAATTACTGAAGCTCTTGTGGAGTCATTAAAGGATGGTATTAGCTCACCAGGCCTTGTATCAGCAACAATTGCACTAAAAGCCGTTGCAGTGAATGATGAAATATGCAGATCGGTTGCTGAAAATGGCGGCATAGATTCATTGCTCATTTGTATTGATGAATCTGGTTTACAGGGGAATAAAGTTGTGGCTAAAGCTTGTTGCTCCTTATTATCAAAGTTGGCAGGAAGTGACTTTAACAAGAGTGCCATTGTTGAAAGAGGAGGGTTGAATAGACTCATCACACTTTCTAGCAGGCTTGCTGATGATCCTTCTGTCCTCCAGGAGGTGATGACTATTATATGCACCCTGTGTTTGCGATCACCTGCGAATGCATCTTTGGCAATGGAAGCAGGAGCAGGAGACCTTGCTATTCAATCAATGCAAAAGTTCCCTCACTCGTATCAACTGCAGAAAAATTCTTGCCTTATGATCCGTAATCTTGTTGCCAGGAATCCAGAAAACAGGCCTATTTTATTGAGTAATGGTATTGAGAAGATAATAAGGAATGCTAAGGAAAGCCACAAAAGTTGTAGAGATGCAGCCGTTGCCGCCCTTAGAGATTTGGGGCTTGAAAACTACAATTCTTAG 1389 43.34 MATAKSTGRTISQQAFDEMVKENIEDLGMEPMEALSDAIETLTLQGVDLSGIVTDTLPGETNPVIQSLDRLKQLQCSDWSDEAVVDEVLGLLDGLIRMCRGEGSGSGAIAARNGGVELMCSVCSKVGDGGRDSVLVSALDALAVFVHDLQSTEAFRQNGGPKMLVEILTKETQNVKILNSGFSVVAAASTGNEVIKESFVELHIDELMVSIMKRHTKGNIPSLYDAIRVLLAADDNRVVASQVYGYARQFAKTGITEALVESLKDGISSPGLVSATIALKAVAVNDEICRSVAENGGIDSLLICIDESGLQGNKVVAKACCSLLSKLAGSDFNKSAIVERGGLNRLITLSSRLADDPSVLQEVMTIICTLCLRSPANASLAMEAGAGDLAIQSMQKFPHSYQLQKNSCLMIRNLVARNPENRPILLSNGIEKIIRNAKESHKSCRDAAVAALRDLGLENYNS 462
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00067 462 Gene3D - 241 460 IPR011989 -
Fso2g00067 462 Gene3D - 63 240 IPR011989 -
Fso2g00067 462 PANTHER UNCHARACTERIZED 6 456 - -
Fso2g00067 462 SMART arm-5 148 190 IPR000225 GO:0005515(InterPro)
Fso2g00067 462 SMART arm-5 285 329 IPR000225 GO:0005515(InterPro)
Fso2g00067 462 SMART arm-5 330 372 IPR000225 GO:0005515(InterPro)
Fso2g00067 462 SMART arm-5 418 457 IPR000225 GO:0005515(InterPro)
Fso2g00067 462 SUPERFAMILY ARM repeat 81 452 IPR016024 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00067 K24166 armadillo repeat-containing protein 6