AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso2g00111 | ATGGGTATCACCGGAGAACTCGTGAGGAGCGCGTTCTCGAAGCATCGATCTTTTGGAACCACCCACGACACCAATGTGATGAGAAACCATGCAGTTGAAAGAAAGAGATGGGCTAGTGTTAGATCATACCTTTGTGGTGATGAATTTAGTTCAATTTTAGCTGAGGAAGATTTAGCTTCTAGAACAAGCTCAAAAGCAGCTGTTATGAATTCTGTTGTTCTAGAAGATTATTCCAACTCTGCTAGAACATCAAAAGCTACTGTCTTTAGTTCAAGAGTTGATGATGATTCGACATCTGTCAAAGGTTCCGAGGCTACTGTCACACAACCGGTTTCTGAACACTCGAATGCGACTCTAGAGGCTGATGAAAAGACCAAAATGATCTCTGAAAATGAAGCTGCAGTAGTCATTCAGTCAGCATTTAGAAGCTTTCTGGCGAGACGTCAAACTAAAAGACTTGAAGAAGTGGATACGAGTGATTGGGATCTAGAGTCTATAGCAACATCAGTAGAAGTCCAAACTGGAAACTCAATAGTTGAGGTTATAGATGGTACCGAAAGTTTCACTCGTCCTGTGCATCATCACAAGGGCGCGAGAGTACAAACGTTGAAGCAAAAGCCAAAAGATTGGGATGATAGCACCGTGAGTAGCAACATCTCGAAAATGAGGATTCAAAATAGACTAGAGGCGTCTACAAGGCGCGAAAGGGCGCTTGCCTATGCTTTCTCACAACAGCTAAGGATCTGCTCAAAGAAGAAGCAAAGTGTGAGATCGGGGAGCGAAACAGAAGCAAACATGAGTTGGAGTTGGCTCGAGAGATGGATGGCGACCCGACAACATGATACTTCTTTCGGGGATATAAGCAAAAGGTTTGAGCAATTAAACGGGAATCAAAAACTAATGGTTAAAAGTAGAGTGATATCAGACTTAGCGGGCGAAGAGAAGGAAAGTTGTGGATCAAACGAAGTTTCTCTTCATTTCGATAACGTTTCTTTGAGCTCAAGAACAGCCGAAAAATCTTACTCTAAGCCTGTTCGAAATAGGGTCAAAGCGACAAGTGCCTCGAGGCGGAAAAAGTCTGTGCGTTACGGTTTAAATAAAGATTGTTGCAAGGTTAACAAGCAAGGAGAAAGAAAAATTAGATGTGACAATAAACAATAA | 1161 | 42.2 | MGITGELVRSAFSKHRSFGTTHDTNVMRNHAVERKRWASVRSYLCGDEFSSILAEEDLASRTSSKAAVMNSVVLEDYSNSARTSKATVFSSRVDDDSTSVKGSEATVTQPVSEHSNATLEADEKTKMISENEAAVVIQSAFRSFLARRQTKRLEEVDTSDWDLESIATSVEVQTGNSIVEVIDGTESFTRPVHHHKGARVQTLKQKPKDWDDSTVSSNISKMRIQNRLEASTRRERALAYAFSQQLRICSKKKQSVRSGSETEANMSWSWLERWMATRQHDTSFGDISKRFEQLNGNQKLMVKSRVISDLAGEEKESCGSNEVSLHFDNVSLSSRTAEKSYSKPVRNRVKATSASRRKKSVRYGLNKDCCKVNKQGERKIRCDNKQ | 386 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso2g00111 | 386 | MobiDBLite | consensus disorder prediction | 336 | 360 | - | - | |
| Fso2g00111 | 386 | Pfam | IQ calmodulin-binding motif | 132 | 150 | IPR000048 | GO:0005515(InterPro) | |
| Fso2g00111 | 386 | MobiDBLite | consensus disorder prediction | 94 | 116 | - | - | |
| Fso2g00111 | 386 | MobiDBLite | consensus disorder prediction | 94 | 121 | - | - | |
| Fso2g00111 | 386 | PANTHER | IQ-DOMAIN 5-RELATED | 199 | 358 | - | - | |
| Fso2g00111 | 386 | ProSiteProfiles | IQ motif profile. | 130 | 159 | - | - | |
| Fso2g00111 | 386 | Gene3D | - | 27 | 159 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso2g00111 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fso | Fso-Chr2:1599093 | Fso8g01631 | Fso-Chr8:43872673 | dispersed | |
| Fso | Fso-Chr2:1599093 | Fso8g01629 | Fso-Chr8:43848395 | transposed |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Fso1g01108 | . | 1 | 469 | IQD Protein family | AT3G49260 | 48.765 | 3.47e-99 | 303.0 | |
| Fso2g00111 | . | 1 | 381 | IQD Protein family | AT5G35670 | 44.588 | 1.05e-75 | 239.0 | |
| Fso2g00283 | ACH | 1 | 230 | IQD Protein family | AT3G15050 | 51.21 | 5.81e-76 | 230.0 | |
| Fso3g01711 | . | 1 | 413 | IQD Protein family | AT2G26180 | 60.314 | 1.98e-144 | 417.0 | |
| Fso3g01899 | ACH | 162 | 484 | IQD Protein family | AT4G23060 | 42.571 | 8.34e-61 | 203.0 | |
| Fso3g02312 | . | 1 | 458 | IQD Protein family | AT5G03040 | 43.376 | 8.10e-100 | 303.0 | |
| Fso4g00249 | WGDA | 1 | 379 | IQD Protein family | AT3G22190 | 58.505 | 7.00e-120 | 352.0 | |
| Fso6g00190 | . | 11 | 534 | IQD Protein family | AT4G00820 | 43.75 | 3.94e-111 | 337.0 | |
| Fso6g00735 | . | 1 | 353 | IQD Protein family | AT3G16490 | 45.722 | 2.54e-58 | 192.0 | |
| Fso6g00841 | . | 1 | 157 | IQD Protein family | AT5G13460 | 30.769 | 3.12e-17 | 80.1 | |
| Fso7g00427 | WGDA | 1 | 443 | IQD Protein family | AT5G13460 | 43.584 | 9.10e-97 | 294.0 | |
| Fso8g00077 | . | 1 | 332 | IQD Protein family | AT3G16490 | 42.486 | 8.46e-42 | 148.0 | |
| Fso8g01375 | . | 53 | 352 | IQD Protein family | AT5G62070 | 44.737 | 9.90e-38 | 138.0 | |
| Fso8g01629 | ACH | 1 | 451 | IQD Protein family | AT5G03040 | 38.596 | 2.99e-81 | 258.0 | |
| Fso8g01631 | ACH,WGDA | 1 | 451 | IQD Protein family | AT5G03040 | 38.596 | 2.99e-81 | 258.0 | |
| Fso8g01804 | WGDA | 194 | 260 | IQD Protein family | AT1G19870 | 55.072 | 1.13e-12 | 69.3 | |
| Fso9g01560 | . | 1 | 460 | IQD Protein family | AT5G03040 | 43.096 | 7.23e-103 | 311.0 | |
| Fso9g01960 | ACH | 1 | 517 | IQD Protein family | AT3G59690 | 41.058 | 1.86e-110 | 335.0 | |
| Fso10g01535 | . | 1 | 307 | IQD Protein family | AT4G14750 | 33.436 | 5.35e-36 | 133.0 | |
| Fso10g01635 | . | 11 | 534 | IQD Protein family | AT4G00820 | 53.501 | 7.12e-153 | 446.0 | |
| Fso10g02293 | ACH | 1 | 551 | IQD Protein family | AT1G74690 | 35.739 | 2.28e-77 | 252.0 | |
| Fso10g02702 | . | 36 | 100 | IQD Protein family | AT3G51380 | 78.462 | 9.03e-28 | 97.4 | |
| Fso10g02911 | ACH | 1 | 575 | IQD Protein family | AT1G74690 | 37.907 | 1.51e-77 | 252.0 | |
| Fso10g03688 | . | 1 | 350 | IQD Protein family | AT1G74690 | 38.843 | 2.87e-52 | 183.0 | |
| Fso10g04014 | ACH | 1 | 353 | IQD Protein family | AT3G16490 | 51.1 | 9.65e-94 | 285.0 | |
| Fso10g04056 | . | 1 | 399 | IQD Protein family | AT1G72670 | 43.765 | 9.04e-86 | 265.0 | |
| Fso11g00209 | WGDA | 1 | 388 | IQD Protein family | AT3G22190 | 54.703 | 4.54e-117 | 345.0 | |
| Fso11g00383 | ACH | 1 | 480 | IQD Protein family | AT4G23060 | 41.851 | 1.26e-64 | 213.0 | |
| Fso11g01013 | ACH | 50 | 225 | IQD Protein family | AT3G15050 | 49.432 | 2.79e-50 | 164.0 | |
| Fso12g00406 | WGDA | 1 | 443 | IQD Protein family | AT5G13460 | 41.02 | 1.11e-83 | 261.0 | |
| Fso12g02074 | . | 1 | 260 | IQD Protein family | AT2G33990 | 43.662 | 2.84e-63 | 198.0 | |
| Fso12g02154 | ACH | 1 | 453 | IQD Protein family | AT3G59690 | 47.347 | 5.42e-122 | 364.0 | |
| Fso12g02421 | . | 1 | 456 | IQD Protein family | AT5G03040 | 45.752 | 6.23e-113 | 335.0 | |
| Fso13g00123 | . | 51 | 352 | IQD Protein family | AT5G62070 | 45.133 | 9.44e-40 | 143.0 | |
| Fso13g01785 | ACH | 63 | 236 | IQD Protein family | AT3G15050 | 51.724 | 1.21e-61 | 192.0 | |
| Fso13g01907 | ACH | 1 | 353 | IQD Protein family | AT3G16490 | 49.015 | 4.89e-89 | 273.0 | |
| Fso14g00219 | WGDA | 456 | 794 | IQD Protein family | AT1G19870 | 36.508 | 1.85e-41 | 160.0 | |
| Fso14g00680 | ACH,WGDA | 1 | 379 | IQD Protein family | AT5G03040 | 42.353 | 1.84e-79 | 253.0 | |
| Fso16g00376 | ACH,WGDA | 1 | 406 | IQD Protein family | AT3G52290 | 49.091 | 2.25e-99 | 301.0 | |
| Fso16g00726 | ACH,WGDA | 1 | 575 | IQD Protein family | AT1G74690 | 37.221 | 1.51e-71 | 237.0 | |
| Fso18g02249 | ACH,WGDA | 1 | 575 | IQD Protein family | AT1G74690 | 38.593 | 3.52e-84 | 271.0 | |
| Fso18g02737 | ACH,WGDA | 1 | 445 | IQD Protein family | AT5G03040 | 46.316 | 3.28e-111 | 333.0 | |
| Fso18g03045 | . | 7 | 331 | IQD Protein family | AT5G07240 | 46.356 | 1.68e-46 | 160.0 | |
| Fso10000039.1g00002 | . | 1 | 460 | IQD Protein family | AT3G59690 | 47.817 | 6.51e-125 | 372.0 |