Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Fso2g00127	ATGGATTTCTCAGAATCTACAAAAGTCGTATACGATAGAGTACAAAAGATAGACCCCGAAAACGTCTCAAAGATCATAGGGTATCTTCTTTTACAAGATCATGGTGAACGTGAAATGATAAGATTAGCGTTTGGTCCTGATAATTTAATACATGGTTTAATCAATAAAGCTAAAGCCAACCTTAAGCTACCTTCAAACACAACTGTTGGTCAATCGATTTCACCTCCTCAAGTGACCTCTATCCCTGATATGCACGTTGGCCCTATTCACTTCACACCGTTCTCTCCTTCAACCCGTCATTCACCATTAACGATCCAAGTTCCCACACGTTGTTGTGATCACCATGGTCGACCCGTTGACTTTATTCCCATGGTTTACCCGGGCTCATTTCCTGAAGATTATGACCTTCACAACCACATCCGTTTCATGTCTTTAGAAGATCAAATGGAGCCCGTTGACAGCCCGGATTTTTCCTCTAGTAATTACTACTCATCCGAGCCTGCATTGGGTCCTCTGGCCAATAGGAGGTCCCCAAGTTTACCTGAGTTTCCTTTCAAAGTGTGTCATTACTTCATTAAAGGGTTTTGTAGACATGGAAACAACTGTAGGTATTTGCACCCTACTCCCGAAAGCTTTTCACAAATCTTTAACTCTAAGTTGAGTGAAGATGATAACATCTTTTTGCCCATGTCGCTTGAGAAACTAGAGCTAGAACTCACTGAGTTACTGAAATCAAGAAGTGGGTTTCCAGTTTCCATTGCTTCTTTACCAATGGTATATTATGAAAAATTCGGTAAAACGCTTCAAGCTGAAGGATATATGACCGAAAGTCAAAGACACGGGAAAGCTGGTTATAGTTTGACCAAACTTCTTGCGCGCCTCAAAAGCATTTGCCTCATTGATAGGCCACATGGGCAGCATGCGGTCGTGTTGGCTGATGACATGGCAAAATGCATGGATCATATTGGAGATAGAAACGAACATGGTGGAATTGTCGCGGGTTCTAGGCAGATATACTTGACTTTTCCTGCTGAAAGTACATTTTCAGAGCTTGATGTATACAATTATTTCAACAAATTCGGGCCAGTTCGTGACGTGAGAATTCCATGTCAACAGAAGAGAATGTTTGGATTCGTGACTTTTGTGTTTGCGGATACAGTTAGGCATATTTTAAACAAGGGGAACCCTCATTTTGTTAGTGGTGCACGTGTTTTGGTCAAACCATACCGTGAAAAATGCAAGATTGATGATAAGAAACATGGTTACACATTTCAGCATCATATGTACCAAGGCTCTCACTGTCTTGATAGTGAACTCGGGCTGCAGTCAAGCTATGCTCATGCACAAGATGCAGACTTTCATTCTACTGAGCGTTTTAAATATTTTCTTGATGCTTTAAGCAACGGCGCAGCTAGTGACCAAAAGATTAGGCAGATTAATACCGAATACAACGAGCAAGAAAGTAGCCAGGGATTGAATCTTCCAGACAGCCCGTTTGCATCCGGATTAGCGGGTGAAATATCAACAGTTATATAG	1536	41.54	MDFSESTKVVYDRVQKIDPENVSKIIGYLLLQDHGEREMIRLAFGPDNLIHGLINKAKANLKLPSNTTVGQSISPPQVTSIPDMHVGPIHFTPFSPSTRHSPLTIQVPTRCCDHHGRPVDFIPMVYPGSFPEDYDLHNHIRFMSLEDQMEPVDSPDFSSSNYYSSEPALGPLANRRSPSLPEFPFKVCHYFIKGFCRHGNNCRYLHPTPESFSQIFNSKLSEDDNIFLPMSLEKLELELTELLKSRSGFPVSIASLPMVYYEKFGKTLQAEGYMTESQRHGKAGYSLTKLLARLKSICLIDRPHGQHAVVLADDMAKCMDHIGDRNEHGGIVAGSRQIYLTFPAESTFSELDVYNYFNKFGPVRDVRIPCQQKRMFGFVTFVFADTVRHILNKGNPHFVSGARVLVKPYREKCKIDDKKHGYTFQHHMYQGSHCLDSELGLQSSYAHAQDADFHSTERFKYFLDALSNGAASDQKIRQINTEYNEQESSQGLNLPDSPFASGLAGEISTVI	511

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Fso2g00127	511	ProSiteProfiles	Eukaryotic RNA Recognition Motif (RRM) profile.	336	411	IPR000504	GO:0003723(InterPro)
	Fso2g00127	511	SUPERFAMILY	CCCH zinc finger	185	207	IPR036855	GO:0046872(InterPro)
	Fso2g00127	511	ProSiteProfiles	Zinc finger C3H1-type profile.	182	209	IPR000571	GO:0046872(InterPro)
	Fso2g00127	511	SMART	rrm1-1	337	407	IPR000504	GO:0003723(InterPro)
	Fso2g00127	511	ProSiteProfiles	OST-type HTH domain profile.	231	314	IPR025605	-
	Fso2g00127	511	SMART	c3hfinal6	184	208	IPR000571	GO:0046872(InterPro)
	Fso2g00127	511	FunFam	zinc finger CCCH domain-containing protein 53-like isoform X2	343	414	-	-
	Fso2g00127	511	Pfam	RNA recognition motif	349	395	IPR000504	GO:0003723(InterPro)
	Fso2g00127	511	Gene3D	-	183	266	-	-
	Fso2g00127	511	PANTHER	RNA-BINDING (RRM-RBD-RNP MOTIFS)	1	447	-	-
	Fso2g00127	511	Gene3D	-	342	415	IPR012677	-
	Fso2g00127	511	SUPERFAMILY	RNA-binding domain, RBD	348	426	IPR035979	GO:0003676(InterPro)

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Fso2g00127	-	-

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Fso	Fso-Chr2:1830074	Fso4g00925	Fso-Chr4:12808289	dispersed
	Fso	Fso-Chr3:52752584	Fso2g00127	Fso-Chr2:1830074	transposed
	Fso	Fso-Chr2:1830074	Fso6g02016	Fso-Chr6:47806218	wgd