Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso2g00139 | ATGGCGGCAATACTGGCTTCTAACAGCTGCTATTGCCGTGATGTGGAATTGGTGAATCAAGGGAGAACAGCAGACAATCTCAGCTTCTCAAGATCAGTTTCTAATCAGAAGCTAGATAGGCGTGAATGTACTTCGAATTCGTCTAAAATTGAGAGATGTCGCAGGTTTCATGTTCAGATGCAGCAGACAGAATCACCGATGACATTTGGCACCAATGGTCGACCCGCGAAGCCCATGAAGTTGGGAAGCAAAGGTCAACCAATCACCATGGTTCCCATCAGTGAGGCGGTGAATATTAAACATACGTCAAAAAAAGGATCAGGAACAGTGAATGGATCGATACAAGTTGTTAATGGAACAAGTCTTGTTAAGAGAGAAATCACACCACCACTAGTTAAGTCTGTTAAAGTTAAAGAACCTACAGGATTCCAAGCTGAAGAATATAGGGTCTTGCCATCAGATGAAAGTTTCAAATGGGCAAATGAAAATTATAATTCAGTACATAGATCAATAGATGTGTGGTCTTTTGTTTTGTTTTTTCGTGTTCGTGTTCTACTTGACAATGCAAAGTGGGCATATCTTGGTTCCTTCACAGAAGAAAAACAGAAAAACAGAAGAAGAAAAACAGCTTCATGGTTAAGAGAACGTGTGCTTCAACTTGGTCCAACTTTTATAAAACTTGGCCAATTAGTCTCATCAAGATCAGATTTATTTCCTCATGAATTTGTTGATGAACTCGCCAAGTTACAGGACAGAGTACCAGCCTTCTCATCAGCAAAAGCAAAAGGTTTTATTGAGAAAGAACTTGGAGCTCCAATCGATGTACTATTCAGGGAATTTGAAGAACAACCTATTGCAGCTGCTAGTCTTGGTCAGGTACATCGTGCAATATTACATAACGGAGAGAAAGTAATCGTTAAAGTTCAAAGACCTGGTTTGAAGAAACTTTTTGACATTGATTTAAGAAATTTAAAGCTAGTTGCAGAGTATTTTCAAAGAAGTGAAACTCTTGGTGGCCCTACTAAGGATTGGATAGGTATCTATAATGAATGTGAAAAGATCTTATACCAGGAGATTGATTATATAAATGAAGGGAAAAATGCTGATAGATTTCGTCGAGATTTTCGTAATATAAAGTGGGTCCGAGTGCCTCAAGTATTCTGGGATTATACTGCAACCAAGGTGCTGACATTGGAGTATGTTCCAGGCATTAAAATCAACAATTTAGATGGGATAAAACAAAGGGGTTATAGTCGATCCCGCATCTCTTCACGTGCCATTGAATCATACTTGATTCAGATACTGAAAACAGGTTTCTTTCATGCCGATCCTCATCCTGGAAATCTTGCTATTGATGTGGATGAATCATTAATCTACTATGATTTGGTATGA | 1392 | 38.65 | MAAILASNSCYCRDVELVNQGRTADNLSFSRSVSNQKLDRRECTSNSSKIERCRRFHVQMQQTESPMTFGTNGRPAKPMKLGSKGQPITMVPISEAVNIKHTSKKGSGTVNGSIQVVNGTSLVKREITPPLVKSVKVKEPTGFQAEEYRVLPSDESFKWANENYNSVHRSIDVWSFVLFFRVRVLLDNAKWAYLGSFTEEKQKNRRRKTASWLRERVLQLGPTFIKLGQLVSSRSDLFPHEFVDELAKLQDRVPAFSSAKAKGFIEKELGAPIDVLFREFEEQPIAAASLGQVHRAILHNGEKVIVKVQRPGLKKLFDIDLRNLKLVAEYFQRSETLGGPTKDWIGIYNECEKILYQEIDYINEGKNADRFRRDFRNIKWVRVPQVFWDYTATKVLTLEYVPGIKINNLDGIKQRGYSRSRISSRAIESYLIQILKTGFFHADPHPGNLAIDVDESLIYYDLV | 463 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso2g00139 | 463 | Pfam | ABC1 atypical kinase-like domain | 248 | 461 | IPR004147 | - | |
| Fso2g00139 | 463 | CDD | ABC1-ADCK3-like | 248 | 462 | - | - | |
| Fso2g00139 | 463 | PANTHER | CHAPERONE-ACTIVITY OF BC1 COMPLEX CABC1 -RELATED | 47 | 461 | IPR050154 | GO:0046467(PANTHER)|GO:0055072(PANTHER)|GO:1901031(PANTHER) | |
| Fso2g00139 | 463 | SUPERFAMILY | Protein kinase-like (PK-like) | 250 | 457 | IPR011009 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso2g00139 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fso | Fso-Chr2:1956866 | Fso9g00118 | Fso-Chr9:2406802 | dispersed | |
| Fso | Fso-Chr2:1956866 | Fso6g01992 | Fso-Chr6:47269430 | wgd |