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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00145 ATGAGTGGGGGTAGGGTTTCCATTCCGAACAATGTGAGGAAGACGATCCAGAACATCAAGGAGATCACGGGTCTTCACAGTGAAGATGAGATATATGCAATGCTTGAAGATTGTTCTATGGATCCGAATGAGACCGTTCAGAAGCTCCTCTTGCGGGATCCATATCATGAAGTTAAGAGGAAACGTGACCGCAAGAAAGAGAATGTGAATAAAGAACCTACGGAGTCCAGATGGAAACTGGGATGCAGGGAAGGGGGAACAGGGGTGGCAGGTCGAACTACTCGTCTCGTCGCCATTCTAATGATGTAG 309 47.57 MSGGRVSIPNNVRKTIQNIKEITGLHSEDEIYAMLEDCSMDPNETVQKLLLRDPYHEVKRKRDRKKENVNKEPTESRWKLGCREGGTGVAGRTTRLVAILMM 102
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00145 102 MobiDBLite consensus disorder prediction 59 80 - -
Fso2g00145 102 Pfam GBF-interacting protein 1 N-terminal 8 67 IPR009719 -
Fso2g00145 102 MobiDBLite consensus disorder prediction 59 79 - -
Fso2g00145 102 SUPERFAMILY UBA-like 8 70 IPR009060 GO:0005515(InterPro)
Fso2g00145 102 PANTHER FLOCCULATION PROTEIN (DUF1296) 1 92 IPR044277 GO:0051082(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00145 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr10:83600084 Fso2g00145 Fso-Chr2:2034047 dispersed
Fso Fso-Chr2:2034047 Fso2g02962 Fso-Chr2:66733932 dispersed
Fso Fso-Chr11:11158820 Fso2g00145 Fso-Chr2:2034047 wgd