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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00202 ATGATCTACCTCTTTTTCGCCGTTTTACTCGTCGAAATGGTGACGATTCTGCTGCTGTTGTTCAAAACCCCACTCCGGAAGCTTCTGATCATCGGATTAGATCGTGCGAAACGAGGAAGAGCTCCGTTGGTTGTGAAATCCGTCGGCGCCACGGTGTTTGTCATCATGATGTATAACGTTTATAGTATAACGGAGATCCAGAGCCGTCCGGCGGACGTTATTAATCCTACAGATCAAGTTATTCTCGCTTATCATATGCTCGAAGCTTCTCTTATGGGATTCTCGCTTTTCCTGTCACTAATGATCGATAGACTACATCATTACATAAGAGAACTTCGAATACTTAGAAAAACCATGGAAGCTGCAAAGAAACAAAACAGAGCAGCTGAAGAAACCAAGAACAAAGGTGCAGATGAGGCTAAAATCCTAAATGATGAAATATCCAAACTAAAATCACATATTAAGAAACTCGAATCTGACCATGAGACAAAGGAAAAGGAGATCAAATCTGCAGAAGCTAATTCAGTTGCTCTCAAGAACCAGTCAGAAGGCTTTCTTCTTGAATATGATCGTTTGTTAGCAGAAAACCAAAATCTTCGAGATCAATTGCGGGCCATTGATGACAACATGTCTCATTCTGCTGGAAAGAAGAATATGTGA 660 41.06 MIYLFFAVLLVEMVTILLLLFKTPLRKLLIIGLDRAKRGRAPLVVKSVGATVFVIMMYNVYSITEIQSRPADVINPTDQVILAYHMLEASLMGFSLFLSLMIDRLHHYIRELRILRKTMEAAKKQNRAAEETKNKGADEAKILNDEISKLKSHIKKLESDHETKEKEIKSAEANSVALKNQSEGFLLEYDRLLAENQNLRDQLRAIDDNMSHSAGKKNM 219
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00202 219 Coils Coil 105 181 - -
Fso2g00202 219 PANTHER BCR-ASSOCIATED PROTEIN, BAP 1 200 IPR008417 GO:0005783(InterPro)|GO:0005789(PANTHER)|GO:0006886(InterPro)|GO:0006888(PANTHER)|GO:0016020(InterPro)|GO:0070973(PANTHER)
Fso2g00202 219 FunFam B-cell receptor-associated protein 29 136 199 - -
Fso2g00202 219 Coils Coil 189 209 - -
Fso2g00202 219 Gene3D - 136 199 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00202 K14009 B-cell receptor-associated protein 31
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Event-related genes

Select Gene_1 Gene_2 Event_name
95385 Fso13g01747 Fso2g00202
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr13:57301316 Fso2g00202 Fso-Chr2:2779860 dispersed
Fso Fso-Chr2:2779860 Fso4g00775 Fso-Chr4:10265853 dispersed
Fso Fso-Chr2:2779860 Fso14g02253 Fso-Chr14:54660091 transposed