Gene detail

Gene Search

Species

Gene ID

Example:

Or, Query Sequence

Example:

Gene details

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Fso2g00235	ATGGCTTCTTCTTCTTCTTCTATAAAGACTCCTACTTGGAGTGATCCAAGAAGCAAAATCTTGTTATCTTCTTCAAAAGATGCGGTTTCTTTCAACCCATCATCGATTTCGTTCTGTAAGCGAACGAATTTGAAGAATTCGAAGAAATCGAGAGCGAATTCGATTGTTTCCGCGCTTCAAACGCCTTCGATTCTTCAAATTCCGAAACAGGGCCCGGCGAAAACCTCCACCGGAGCGATCAATTTGCCGCCGTCGACGACTTCGTCTTCTCCGGCGGTCCAACAAAATTGGAACTTGTTACAGAGCCTTGCAGCAATGGCATTGGACGCCATTGAAGACGGATTAAAAGCTCGTGAAAAACAACACCCTTTGCCCAAAACAGCTGACCCAAACGTCCAAATCGCCGGAAACTTCTCGCCGGTGCCGGAGCAACCTGTGCGGCACAATCTACCAGTCGCCGGAAAAATCCCAGATCATATTCAAGGAGTTTATCTACGAAATGGAGCTAACCCCTTGTTCGAACCCACCTCCGGCCACCATTTGTTCGACGGAGACGGTATGATCTTCGCCGTGAAGTTCGACAACGGCACCGCTAGCTTCGCCTGTAGGTTCACTGAAACACAGCGGCTTGTGCAAGAACGAGCCATCGGAAAACCAGTGTTCCCCAAGGCCATCGGAGAACTCCATGGTCACTCCGGCATCGCAAAGCTTTTACTCTTCTACGCTCGTGGGTTATGTGGGTTGATCGATCATACACAGGGGATCGGAGTCGCAAACGCCGGTTTGGTGTACTTCAACAACCGATTACTAGCGATGTCGGAAGACGATTTACCTTATCACGTCAGAATCACCCCCTCCGGCGACCTGAAAACCTCCGGAAGATACGATTTCGACGGTCAATTGAGCTCCACGATGATCGCACACCCGAAACTCGACCCTGTTTCCGGCGAGCTTTTCGCATTGAGCTACGATGTGATCCAAAAACCCTACCTTAAATACTTCCGATTCTCGCCCGACGGGAAGAAATCGAACGACGTAGCGATCGATTTGAAGATTCCGACGATGGTTCACGATTTCGCCATCACTGAAAACTTCGTGGTGGTGCCGGATCATCAAGTGGTGTTCAAGATGTCGGAGATGATCACCGGCGGATCGCCGGTGGTGTATGATAAAGAGAAAGTTTCACGATTTGGGGTTCTTGACAAATACGCAGAAAACGGGTCGGGTATAAAATGGATCGAAGTACCCGATTGCTTCTGCTTTCACCTCTGGAACGCGTGGGAAGAACCAGAGTCCGATGAAGTCGTCGTTATCGGATCTTGCATGACTCCGGCGGACTCCATTTTCAACGAAAGTGACCAAGAGTTAAAAAGCGTTTTATCAGAAATTCGCCTGAATTTATCCACCGGAAAATCCACCCGCCGGCGAATCATCTCGCCGGAGGAAGACGTCAATCTTGAAGCCGGAATGGTCAACAAGAATCTCCTCGGAAGAAAGTCAAAATTCGCTTATCTTGCCATTGCAGAACCATGGCCCAAGGTCTCCGGTTTCGCTAAAGTCGATCTTTCCACCGGAGAAACCAAAAAGTTCATCTACGGCGACAACAAGTACGGCGGCGAACCTCTGTTTCTTCCCACCAACGCCACCACCGCCGCCGCTGAAGACGATGGTCACATACTGGCGTTCGTTCACGACGAAGCCACATGGGAATCGGAGCTTCAGATCATCAACGCAATGACGATGGAATTATCGGCAACAGTGAAGCTACCATCGAGGGTTCCATATGGGTTTCACGGGACATTCATAAGCAGCAACGATTTAGCAACACAGGTGTGA	1836	49.67	MASSSSSIKTPTWSDPRSKILLSSSKDAVSFNPSSISFCKRTNLKNSKKSRANSIVSALQTPSILQIPKQGPAKTSTGAINLPPSTTSSSPAVQQNWNLLQSLAAMALDAIEDGLKAREKQHPLPKTADPNVQIAGNFSPVPEQPVRHNLPVAGKIPDHIQGVYLRNGANPLFEPTSGHHLFDGDGMIFAVKFDNGTASFACRFTETQRLVQERAIGKPVFPKAIGELHGHSGIAKLLLFYARGLCGLIDHTQGIGVANAGLVYFNNRLLAMSEDDLPYHVRITPSGDLKTSGRYDFDGQLSSTMIAHPKLDPVSGELFALSYDVIQKPYLKYFRFSPDGKKSNDVAIDLKIPTMVHDFAITENFVVVPDHQVVFKMSEMITGGSPVVYDKEKVSRFGVLDKYAENGSGIKWIEVPDCFCFHLWNAWEEPESDEVVVIGSCMTPADSIFNESDQELKSVLSEIRLNLSTGKSTRRRIISPEEDVNLEAGMVNKNLLGRKSKFAYLAIAEPWPKVSGFAKVDLSTGETKKFIYGDNKYGGEPLFLPTNATTAAAEDDGHILAFVHDEATWESELQIINAMTMELSATVKLPSRVPYGFHGTFISSNDLATQV	611

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Fso2g00235	611	PANTHER	BETA-CAROTENE DIOXYGENASE	120	603	IPR004294	GO:0009570(PANTHER)\|GO:0010436(PANTHER)\|GO:0016121(PANTHER)\|GO:0016702(InterPro)
	Fso2g00235	611	Pfam	Retinal pigment epithelial membrane protein	143	603	IPR004294	GO:0016702(InterPro)
	Fso2g00235	611	MobiDBLite	consensus disorder prediction	68	92	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Fso2g00235	K09840	9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]

Event-related genes

Select	Gene_1	Gene_2	Event_name
	95072	Fso11g01061	Fso2g00235

Duplication type information

Select	Gene1	Location1	Gene2	Location2	Duplicated-type
	Fso	Fso-Chr2:3220757	Fso9g01120	Fso-Chr9:33355975	dispersed
	Fso	Fso-Chr2:66117997	Fso2g00235	Fso-Chr2:3220757	transposed
	Fso	Fso-Chr11:10867088	Fso2g00235	Fso-Chr2:3220757	wgd
	Fso	Fso-Chr13:56518244	Fso2g00235	Fso-Chr2:3220757	wgd
	Fso	Fso-Chr2:3220757	Fso6g01952	Fso-Chr6:46177359	wgd