AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00238 ATGGGGAATAAGCTGGGGAGGAGGAGACAGCTTGTTGATGAAAAGTATACAAGGCCTCAAGGGTTGTATCAACACAAAGATGTGGATCATAAGAAGCTTCGGAAGCTTATTCTTGATTCGAAGCTTGCTCCTTGTTATCCTGGAGATGATGATTGCAGTTGTGATCTTGAAGAATGCCCTATTTGCTTCTTGTATTATCCGAGTCTGAATAGATCAAGATGTTGCACGAAAGGCATTTGTACAGAGTGTTTTTTGCAGATGAAGACACCTAATTCCACACGGCCTACACAATGTCCCTTTTGTAAAACTTTGAACTATGCTGTGGAGTATAGAGGCATGAAAACTAAAGAGGAAAAGGGGCAGGAGCAAATTGAAGAACAAAGAGTGATAGAAGCAAAAATAAGAATGAGACAAGAAGAAATTCAAGATGAAGAGGAACGGATGCTTAAAAGGCAAGAGACGCGTTCTTCAAGCAGGGTATTTGAACCAAGCGAGGCTGAATATTTCTCCACAGCAGCATCTTCTTCTGAAGGTGAGGAAATAGTTTCTGTTCCAAATCCTGCAACGAATAGACATCCTCCACGCTATAGGGAGAACAGAGACGATGAGTTTGATCTTGATCCGGAAAACATAATGCTCATGGAAGCCATCTGGTTGTCTTTTCAGGAGGATAACAAGCACAGACGTGATAATCCTAACTATGGTGATGCCACCCAATTAGCAAAATACGCCACAGAAGTTCGCCTGTTAGCATCCATGGCCCCACAAGCAGGGTATTCACCTTCCTCCTCATCACCTTCTGGCGGACTTGCCTGCGCCATAGCCGCCCTTGCTGAACGCCAGCAAACAGGAGGTGAATCGTCATCTAACTACAACAATTATAGCGGGAATCTATCAACATACAACGTGCATCCCAACCATAGCCAAACAGGGTTATTATCACTCGATAACCATCTGCAAATCGATCGGGATAATTCAGAAGCATTTGGTGAGTCTACATTCCGGTATGATGGCAATTTGAGTACAACAGACAATAATGATGATGTAAGCAGAGGGCAGTATAGTCAACATGATGAGGTGGAAAACGATGGTTATGGTGGTGGCGGGAACATAGTTCCCGAGAGCTTTGAAGAGCAGATGATGCTAGCCATGGCGGTTTCATTGGCAGAGGCTCGGGCTAGGAGTAGTAGTGCACCGGAGGTTGCGTGGATTTAG 1215 44.44 MGNKLGRRRQLVDEKYTRPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDDDCSCDLEECPICFLYYPSLNRSRCCTKGICTECFLQMKTPNSTRPTQCPFCKTLNYAVEYRGMKTKEEKGQEQIEEQRVIEAKIRMRQEEIQDEEERMLKRQETRSSSRVFEPSEAEYFSTAASSSEGEEIVSVPNPATNRHPPRYRENRDDEFDLDPENIMLMEAIWLSFQEDNKHRRDNPNYGDATQLAKYATEVRLLASMAPQAGYSPSSSSPSGGLACAIAALAERQQTGGESSSNYNNYSGNLSTYNVHPNHSQTGLLSLDNHLQIDRDNSEAFGESTFRYDGNLSTTDNNDDVSRGQYSQHDEVENDGYGGGGNIVPESFEEQMMLAMAVSLAEARARSSSAPEVAWI 404
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00238 404 ProSiteProfiles Zinc finger RING-type profile. 59 102 IPR001841 -
Fso2g00238 404 PANTHER PROTEIN SIP5 1 326 IPR039301 GO:0005737(PANTHER)
Fso2g00238 404 MobiDBLite consensus disorder prediction 332 352 - -
Fso2g00238 404 MobiDBLite consensus disorder prediction 335 350 - -
Fso2g00238 404 MobiDBLite consensus disorder prediction 171 202 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00238 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr2:3320985 Fso6g01935 Fso-Chr6:45864329 wgd