Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso2g00239 | ATGGCGAATATTATAGAAATGAGAGTGCATGTAGATTGCCCTGGATGCGAGAACAAGATCCGAAAAGCTCTTCAAAGACTCAAAGGAGTGGAGAACGTAGACATAGACATGGGGTTACAAAAGGTGACAGTCACTGGAATCGCCGACGAGAAGAAGGTGTTGAAGACGGTGAGAAAAACTGGCCGGCGAGCCGAGATATGGAACATACCCTACAACCCCGATATCCGTACCCATAACTACAATGTTAATCAATATGCTCAACAACAGCAACTACAGCAACAACAAAATGGTGGTTCGGGCCCAGGCCCCACTGCGACATTCTACACTCGACAACCGTCTTCTGCATCATCATATAACTACTACAAACACGGTTATGATGACCAGTATGTTTATAACCCGGTCCAGTCCTCGGGCTTGATCGGGCACCAGACGGGTGCTGCCTTCAGCGATGAGAACACTCATGCTGCCTGTAATATTATGTAG | 483 | 47.2 | MANIIEMRVHVDCPGCENKIRKALQRLKGVENVDIDMGLQKVTVTGIADEKKVLKTVRKTGRRAEIWNIPYNPDIRTHNYNVNQYAQQQQLQQQQNGGSGPGPTATFYTRQPSSASSYNYYKHGYDDQYVYNPVQSSGLIGHQTGAAFSDENTHAACNIM | 160 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso2g00239 | 160 | SUPERFAMILY | HMA, heavy metal-associated domain | 4 | 68 | IPR036163 | GO:0046872(InterPro) | |
| Fso2g00239 | 160 | Gene3D | - | 2 | 66 | - | - | |
| Fso2g00239 | 160 | PANTHER | COPPER TRANSPORT PROTEIN ATOX1-RELATED | 4 | 160 | IPR045181 | GO:0046872(InterPro) | |
| Fso2g00239 | 160 | MobiDBLite | consensus disorder prediction | 88 | 109 | - | - | |
| Fso2g00239 | 160 | CDD | HMA | 6 | 65 | IPR006121 | GO:0046872(InterPro) | |
| Fso2g00239 | 160 | ProSiteProfiles | Heavy-metal-associated domain profile. | 2 | 65 | IPR006121 | GO:0046872(InterPro) | |
| Fso2g00239 | 160 | Pfam | Heavy-metal-associated domain | 8 | 62 | IPR006121 | GO:0046872(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso2g00239 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fso | Fso-Chr15:66806317 | Fso2g00239 | Fso-Chr2:3325116 | dispersed | |
| Fso | Fso-Chr2:3325116 | Fso7g01191 | Fso-Chr7:18384348 | dispersed | |
| Fso | Fso-Chr2:3325116 | Fso15g01357 | Fso-Chr15:56267096 | transposed |