Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Fso2g00271 | ATGGCTTCTTCTTCAACTTTCATTTTACTTTTTCTCTGTTTTCAACTGTTTTCCACCATTTCTGAAGCTGTTGTACCGGATTCAGAAACCTTCACTTACGTTAACGAAGGCGATTTCGGCGATTACATCGTCGAATACGATGCCAATTACCGCGCTCTTCCCCCTTTTAGCAACCCATTCCAACTATGCTTCTACAACACAACCCCTAACGCATTCACTCTAGCCCTCCGCATGGGCACGGTTCGATCCGAATCGCTCATGCGGTGGGTCTGGGAAGCGAACCGAGGGAACCCGGTTCGCGAAAACGCCACCCTGTCCTTCGGGACGGACGGCAACCTGGTCCTCACGGACGCCGACGGACGGGTCGTGTGGCAAACGAACACCGCGAACAAGGGTGTGGTTGGTTTTCAGGTGCTTCCCACGGGTAACATGGTTCTTCATGACGGTAAGGGTAATTACTTATGGCAAAGCTTTGATTCACCAACAGACACTCTTCTTGTGGGTCAAACGCTTCGAGCCGGTGGTCCGAATAAGCTCGTGAGCCGCCTTTCGGAGGCGAGCAACGTCGACGGACCGTATAGTTTGGTGATGGAGCCGAAAGGGTTAGCCATGTATTACAAAAGCCCGAACTCGCCTCGACCAATGCTTTACTGGTCGTCTAGCGAATGGTTCACCATTGACAAAGGTAGTTTGAGCAACCTAACGCTTACATCCGTCCCAGACACCGATGAGGGCTTTCTTTACTACTTGGCGTTCGAGTACTTCACCACAAACCCGACATCGTCTTCGAACCGCTTCATGGCGTATACGCGATACAACAACACGTTATCGTATCTTCGGCTGGGGATAGACGGAAACCTTAGGTTCTACACGTATAACCCGAACGTGCAAGGCGTGTCGTGGGAGTTGGTGTACACGTTTCTCGATCGCGATTCGATGGAAGGCGAGTGTCAGTTACCGGGGCGATGTGGGAACTTTGGGTTGTGTGAGGATAACCAGTGTGTCGCGTGCCCGACGCCGAATGGGCTAAGTGGTTGGAGCAAAGAGTGTGAGGTGAAAAAGGTGACATCTTGTAAAGCTAGTGACTTTTATTATTACAAGCTTGAAGGGGTTGATCATTTTATGATCAAGTACACTAGGGGTGACGCGACAAAACAAAGCGATTGCGAAAGCAAATGCACGAGGGATTGTAAGTGCATGGGGTACTTCTATCACACCGATCGATCGAGGTGTTGGATCGCTTATGATTTGAAAACATTAACACGAGTTGGAAACTCGACTCATTTGGCATATATCAAAACACCCAACAAGTAA | 1314 | 49.62 | MASSSTFILLFLCFQLFSTISEAVVPDSETFTYVNEGDFGDYIVEYDANYRALPPFSNPFQLCFYNTTPNAFTLALRMGTVRSESLMRWVWEANRGNPVRENATLSFGTDGNLVLTDADGRVVWQTNTANKGVVGFQVLPTGNMVLHDGKGNYLWQSFDSPTDTLLVGQTLRAGGPNKLVSRLSEASNVDGPYSLVMEPKGLAMYYKSPNSPRPMLYWSSSEWFTIDKGSLSNLTLTSVPDTDEGFLYYLAFEYFTTNPTSSSNRFMAYTRYNNTLSYLRLGIDGNLRFYTYNPNVQGVSWELVYTFLDRDSMEGECQLPGRCGNFGLCEDNQCVACPTPNGLSGWSKECEVKKVTSCKASDFYYYKLEGVDHFMIKYTRGDATKQSDCESKCTRDCKCMGYFYHTDRSRCWIAYDLKTLTRVGNSTHLAYIKTPNK | 437 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Fso2g00271 | 437 | ProSiteProfiles | Bulb-type lectin domain profile. | 28 | 159 | IPR001480 | - | |
| Fso2g00271 | 437 | SMART | blect-4 | 44 | 161 | IPR001480 | - | |
| Fso2g00271 | 437 | PANTHER | G-TYPE LECTIN S-RECEPTOR-LIKE SERINE-THREONINE-PROTEIN KINASE SD2-5 | 52 | 435 | IPR051343 | - | |
| Fso2g00271 | 437 | CDD | B-lectin | 44 | 161 | IPR001480 | - | |
| Fso2g00271 | 437 | Pfam | S-locus glycoprotein domain | 229 | 342 | IPR000858 | GO:0048544(InterPro) | |
| Fso2g00271 | 437 | Pfam | D-mannose binding lectin | 90 | 172 | IPR001480 | - | |
| Fso2g00271 | 437 | Gene3D | - | 40 | 160 | IPR036426 | - | |
| Fso2g00271 | 437 | FunFam | Os04g0303100 protein | 80 | 214 | - | - | |
| Fso2g00271 | 437 | SUPERFAMILY | alpha-D-mannose-specific plant lectins | 69 | 219 | IPR036426 | - | |
| Fso2g00271 | 437 | ProSiteProfiles | PAN-Apple domain profile. | 358 | 435 | IPR003609 | - | |
| Fso2g00271 | 437 | PIRSF | SLG | 1 | 437 | IPR035446 | - | |
| Fso2g00271 | 437 | CDD | PAN-AP-plant | 357 | 435 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Fso2g00271 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Fso | Fso-Chr2:3471008 | Fso2g00271 | Fso-Chr2:3833783 | dispersed | |
| Fso | Fso-Chr2:3480572 | Fso2g00271 | Fso-Chr2:3833783 | dispersed | |
| Fso | Fso-Chr2:3819179 | Fso2g00271 | Fso-Chr2:3833783 | dispersed | |
| Fso | Fso-Chr2:3833783 | Fso14g00234 | Fso-Chr14:3634980 | dispersed | |
| Fso | Fso-Chr2:3821999 | Fso2g00271 | Fso-Chr2:3833783 | tandem |