AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00292 ATGGCTACCAATTCAGTTGAGGTTGATAATGTTGAAGAATCAGAAGTTCATGTCTTCTCATCGTCGACAGAGTTGCTTGACAAGCTGCATCAGAAGTGGAAATCAGTTGAGAAACTGCCATACCCTGCAATGTATTCAAGTGTTTACGGTGGGATTATTCTTGATCCTGCTATGATGGTCATCCCGATCGATGATCATATGGCGCATCGAGGCCATGGTGTGTTCGATACTGCCATCATCCTTGATGGACACCTGTATGAACTTGATGGTCATCTTGATCGAATCCTCGTATCAGCATCGAAAGCCAAGCTCTCGCCTCCATTCCCAAGATCAACTCTTCGATCGATCCTTATCCAGCTGGCAGCCGTATCAAAATGCAAGAAAGGAACTTTAAGATATTGGTTAAGTGCAGGACCAGGGGATTTCTTACTTACTCCTTCAGCGTCCACAACATCTGCGTTCTATGCAATCGTTATGATGAAGAATTCTCGCAGTGTAAAGAAGGCGTAA 510 44.31 MATNSVEVDNVEESEVHVFSSSTELLDKLHQKWKSVEKLPYPAMYSSVYGGIILDPAMMVIPIDDHMAHRGHGVFDTAIILDGHLYELDGHLDRILVSASKAKLSPPFPRSTLRSILIQLAAVSKCKKGTLRYWLSAGPGDFLLTPSASTTSAFYAIVMMKNSRSVKKA 169
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00292 169 Pfam Amino-transferase class IV 73 157 IPR001544 GO:0003824(InterPro)
Fso2g00292 169 FunFam D-amino-acid transaminase, chloroplastic 21 159 - -
Fso2g00292 169 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 48 158 IPR036038 GO:0003824(InterPro)
Fso2g00292 169 Gene3D - 11 160 IPR043131 -
Fso2g00292 169 PANTHER AMINO-ACID AMINOTRANSFERASE 33 160 IPR050571 GO:0019752(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00292 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr2:4060402 Fso3g01316 Fso-Chr3:33938020 dispersed