AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00301 ATGTCACTGCTGGGTTGTTTTCGCAGTCATTTCATCAAACACCTTTCGTGCACTCCATTCTCGTCGGTTCGAACCACTGCAAATCTCACTCCGTTGTGCCCTTTCAAGCTAATTGGTTCCACCACAGATCACCCATCAAGAAATTTGAGAGAGTTTTTGAATTTGAGATCAGTTACTGCAGCATTTTCATCATCTTCTTCTGCTTCAGAAACTCCAACCACTGGTTCATACCTTTCTGTTGATATTCAAAGTCGTCAAGATGTTGCGGATATGCTTTCAGAAGCGCTTTTATGTTTTGGCGCTGTTTCAACAAGCGTGTTTGAACCCGACAGTTGCATATCGAACGATGAGATTTCGATTGTTTCAATATTCGCTGTATCTCATGATGTGCATCAAAGTATTGCACTGGCAGCTGATTCAATAGGCTTGAAAGAAACACCAGTTTACAAAGTCACCACAGGATACCAGTCTGATTGGATCGAAAATTCTAAGGAATCTTTTCATCCTGTTGAAGTAACAGAAGGACTTTGGATTGTACCGGAGTGGAAAACTCCCCCGGACATCCAAGCAACAATAATAAGTCTAAACCCAGGGCTTGCTTTTGGAACCGGCGACCACCCAACTACCAAATTATGTCTGCTATTATTGCACAAATTAATCAAAGGTGGTGAAAAAGTTTTGGATTATGGCACAGGTTCAGGGATTCTTGCAATTGCAGCACTAAAGTTTGGTGCAGCCTTAGCCGTTGGGTTCGACATAGATCCTCAAGCCATAACAGCTGCACGTCATAACGCTGCTTTGAACAACTTAGGACCCGACAAACTGGAACTGCAGGTTGTTCCTAGTAACTTTAGCCCTACGTCAACAGACCAATGGCAATGGGCTATGAAGAGTGACAGTATAACTGAGCATGGTGTGAAAATTGTTAATGAGAAGGAGAAGTACGAAGTAGTTGTTGCAAATATTCTTTTGAACCCGTTGCTAGATTTGGCTGATCATATTGTTTCTTATGCTAAACCTGGTGGTGTCGTCGGTCTCTCTGGTATTATCTTAGAGCAGGTATCTACGGTTGTGGACCGATACTCGGATCTTTTGGACGGGATTACTGTGTCACAGATTGATGATTGGGCTTGCATACGTGGCACAAAGAGGAAGGCTGGGTAA 1164 43.04 MSLLGCFRSHFIKHLSCTPFSSVRTTANLTPLCPFKLIGSTTDHPSRNLREFLNLRSVTAAFSSSSSASETPTTGSYLSVDIQSRQDVADMLSEALLCFGAVSTSVFEPDSCISNDEISIVSIFAVSHDVHQSIALAADSIGLKETPVYKVTTGYQSDWIENSKESFHPVEVTEGLWIVPEWKTPPDIQATIISLNPGLAFGTGDHPTTKLCLLLLHKLIKGGEKVLDYGTGSGILAIAALKFGAALAVGFDIDPQAITAARHNAALNNLGPDKLELQVVPSNFSPTSTDQWQWAMKSDSITEHGVKIVNEKEKYEVVVANILLNPLLDLADHIVSYAKPGGVVGLSGIILEQVSTVVDRYSDLLDGITVSQIDDWACIRGTKRKAG 387
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00301 387 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 145 376 IPR029063 -
Fso2g00301 387 CDD AdoMet-MTases 225 344 - -
Fso2g00301 387 Pfam Ribosomal protein L11 methyltransferase (PrmA) 77 383 - -
Fso2g00301 387 Gene3D Vaccinia Virus protein VP39 166 387 IPR029063 -
Fso2g00301 387 Hamap Ribosomal protein L11 methyltransferase [prmA]. 73 383 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Fso2g00301 387 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 77 384 IPR050078 GO:0005739(PANTHER)|GO:0008276(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00301 K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]