AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00311 ATGACTGTACACTGTGGGTTTGTAAAAGGTTGCAGACCTGGTTACAAAACTGGATTCGATATCGATGTATCTGATCTTGTGGAGTTGGAGCAATTTCATGATATTATTGTTGCATCAGCCATATTTGGAAACTATGATGTAATTCAGCAGCCAACTAAGATTAGTGAGGCTGCAAGTAAAAACATACCATTTTATATGTTTATTGATGAAGAAACTGAAGCATATATGAGAAATTCTAGCGCTTTGGACTATAGAATGAAGGTTGGATTATGGAGAATTATTGTTGTGCATAATGTTCCTTACACGGATTCTAGACGAAATGGAAAGGTCCCGAAGCTTTTACTACACAGACTCTTTCCAAATGTTCGGTATTCCATATGGATTGACGGAAAGCTGCAACTTGTTGTGGACCCATATCAACTTCTCGAAAGGTTTTTATGGCGCCACAATGCTACTTTTGCTATTTCAAAACATTATAGGCGGTTTGATGTGTTTGAAGAAGCTGAAGCTAATAAAGCTGCAGGGAAATACGACAATGCATCCATTGATTACCAGATTAACTTTTACAAAAACGAGGGTCTAACACCTTATTCTGAGGCTAAGCTTCCTATAATCAGTGATGTTCCGGAAGGGTGTGTCATCATAAGAGAACATATTCCAATAACGAATCTCTTCACGTGTTTGTGGTTCAATGAAGTTGACCGGTTTACCTCAAGAGATCAGTTAAGTTTTGCTACTGTAAGAGACAAAATCATGGCTCAAGTCAACTGGAGTATTAATATGTTTATGGATTGTGAAAGAAGGAATTTTGTGATACAGGCATACCATAGAGATCTACTAGAGCACATGCCACCACCTGCTGCTAAAATAAGTAGTTCAAGACGGGCACGAGTTAATGTTCCTGTTACAGTTCCTATACCTGTGAGAGGTAATAATTCATCTGCCAAAAGTTCAGTAAAGAAAAACGCTGTTAAACGGGGGAAAGGAGAGAGGAGATCTCGTTCCAGAAGGCGTTCGAAAAATCCCGGTAATAGGGACAACACGTTCATTTGA 1053 38.84 MTVHCGFVKGCRPGYKTGFDIDVSDLVELEQFHDIIVASAIFGNYDVIQQPTKISEAASKNIPFYMFIDEETEAYMRNSSALDYRMKVGLWRIIVVHNVPYTDSRRNGKVPKLLLHRLFPNVRYSIWIDGKLQLVVDPYQLLERFLWRHNATFAISKHYRRFDVFEEAEANKAAGKYDNASIDYQINFYKNEGLTPYSEAKLPIISDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFATVRDKIMAQVNWSINMFMDCERRNFVIQAYHRDLLEHMPPPAAKISSSRRARVNVPVTVPIPVRGNNSSAKSSVKKNAVKRGKGERRSRSRRRSKNPGNRDNTFI 350
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00311 350 MobiDBLite consensus disorder prediction 306 320 - -
Fso2g00311 350 PANTHER ALKALINE CERAMIDASE-RELATED 1 314 IPR006852 -
Fso2g00311 350 Pfam TOD1-MUCI70, glycosyltransferase-like domain 1 276 IPR048354 -
Fso2g00311 350 MobiDBLite consensus disorder prediction 303 350 - -
Fso2g00311 350 MobiDBLite consensus disorder prediction 321 339 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00311 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr12:11701068 Fso2g00311 Fso-Chr2:4269325 dispersed
Fso Fso-Chr2:4269325 Fso2g02911 Fso-Chr2:66241732 dispersed
Fso Fso-Chr2:4269325 Fso7g00865 Fso-Chr7:11039251 transposed