AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00337 ATGACGGCAATCTTATCGTTGGCTACATCCCCAATCAACTTCAAGGTGATTAAGAATTCAACCAGAACCGTAGTTCCATTACAGTCAAGCTCTCGAATCGCCATACCTAATAATCATCAACATCCTGCTCCTTTGTTTGTTCCAGAGGTTGAAAGTGCAGTTGATACCCTGTATCCCGAATTCAGAGCCGTTGATAATCTTGTGGCACACAATACATCTAGAGTTCTCAAAGCTTTTCAGAATGCTAGGGTTGGATCTCATCACTTTGGTGGTTGCACTGGCTATGGCCATGAAGAAGCCGGGGGGCGAGAAGCCCTTGACCAAGCTTTTGCTGAAATTTTTGGTGCTGAAGCTGCAATTGTCCGCTCGCAGTTCTTCTCAGGGACTCATGCTATTACCTGTGCCCTTTTTGCTTTCTTGAGACCAGGTGATGAGCTTTTGGCTGTTGCTGGTGCTCCTTATGATACACTGGAGGAAGTTATAGGAATCAGGGATGACAATGGCATAGGTTCCTTGAAAGATTTTGGAATCAGTTATCGAGAAGTTGCACTTGCAGATGATGGGGAGGTTGATTGGGATGCTCTTGAGGTTGCTTTAAAACCTCAAACGAAATGTGCTCTTATTCAAAGATCATGTGGGTATTCTTGGCGTAAAAGTTTAAGCGTGAATGAAATTTCTAGAGCAATACACATCATCAAGTCGCAAAATCCAAATTGTATGGTTATGGTGGATAATTGCTATGGTGAATTCACAGAAGCCATTGAACCTCCAATGGTGGGTGCAGATCTTATTGCAGGAAGTTTAATAAAAAATCCAGGTGGAACAATCGCACCATGTGGTGGATACGTTGCAGGGAACGAAAAATGGGTAAAAGCAGCAGCAGCCCGTCTCTCTGCACCAGGTCTTGGCGTTGATTGCGGGTCAACGCCCGGTGATATCATGAGAACATTTTTTCAAGGATTATATCTCTCACCTCAAATGGTTGGGGAAGCAATTAAGGGAGGTTTACTTATCGCTGAAGTTATGTCCACGCAAGGTTACAAAGTCCAGCCACTTCCTCGCGTATCTCGTCACGACATAGTACAGGCTGTACAACTTGGAAGCCGTGAGAAGCTTCTTGCTTTCTGTGAGGCTGTACAAAGAAGCTCACCTGTAAGCTCTTATACAAAGCCGATAGCAGGATTGACAGCTGGCTATGCATCTGAGGTGATCTTTGCTGACGGGACATTTATAGATGGGAGCACGAGCGAGCTCTCGTGTGATGGACCATTAAGGGAGCCTTTCTGTGTGTTCTGTCAGGGTGGCACTCATTGGACTCAGTGGGGGCTAGTTCTGGGTGAGGTTTTAAATTCTTTGTAG 1359 45.18 MTAILSLATSPINFKVIKNSTRTVVPLQSSSRIAIPNNHQHPAPLFVPEVESAVDTLYPEFRAVDNLVAHNTSRVLKAFQNARVGSHHFGGCTGYGHEEAGGREALDQAFAEIFGAEAAIVRSQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDDNGIGSLKDFGISYREVALADDGEVDWDALEVALKPQTKCALIQRSCGYSWRKSLSVNEISRAIHIIKSQNPNCMVMVDNCYGEFTEAIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGNEKWVKAAAARLSAPGLGVDCGSTPGDIMRTFFQGLYLSPQMVGEAIKGGLLIAEVMSTQGYKVQPLPRVSRHDIVQAVQLGSREKLLAFCEAVQRSSPVSSYTKPIAGLTAGYASEVIFADGTFIDGSTSELSCDGPLREPFCVFCQGGTHWTQWGLVLGEVLNSL 452
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00337 452 SUPERFAMILY PLP-dependent transferases 72 424 IPR015424 -
Fso2g00337 452 Gene3D - 98 305 IPR015421 -
Fso2g00337 452 Gene3D - 306 452 - -
Fso2g00337 452 PANTHER CYS OR MET METABOLISM PYRIDOXAL-PHOSPHATE-DEPENDENT ENZYME 12 452 IPR009651 -
Fso2g00337 452 Pfam Methionine gamma-lyase 51 450 IPR009651 -
Fso2g00337 452 Gene3D - 47 97 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00337 - -