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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00342 ATGCTAGCTCAACAGCAGTACCTACTTATGGCTGCAGCAGCTAAATCAGGAGGCTTGCCAAATTTAGTTGGGAACGGGCAACAAGTATCTGGTGGTAGTGCTACAAACTCGTCCAATCAAAATTGGCCAAATATCGGCTATCAAATTCCTGGAATGCAGATGCCAGCTTCTGGAAAAGTTGAATTAGATAAATACTTGCAGCAGATGGGGAACATGGGAGCAGCAAATCCAGTTGGGAATTCATTTCAGGTTCCAACATCCAGCATATACACAATGGGCCTAAATACAAATACCAATGGCATGATGCCAGCTGGAATTATGGGGCAAAATTCTTCTTTTAACAGCATGGGGCCCTCTGGGGCATCTAAACCACAGTCTACTGCTCAGGTATCATCTGCATCCCCATCACAGTCAGCAAAAGATTATGATTTCTCGTCGTTAACTCAAGGGATGTTCTCAAAACCATGA 468 44.02 MLAQQQYLLMAAAAKSGGLPNLVGNGQQVSGGSATNSSNQNWPNIGYQIPGMQMPASGKVELDKYLQQMGNMGAANPVGNSFQVPTSSIYTMGLNTNTNGMMPAGIMGQNSSFNSMGPSGASKPQSTAQVSSASPSQSAKDYDFSSLTQGMFSKP 155
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00342 155 MobiDBLite consensus disorder prediction 106 155 - -
Fso2g00342 155 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD5 1 154 IPR044520 GO:0005096(InterPro)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00342 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr2:4662952 Fso9g00293 Fso-Chr9:5147600 dispersed
Fso Fso-Chr2:4662952 Fso2g00345 Fso-Chr2:4676342 proximal