AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00422 ATGGATATTTATGTCTTTGCGACTCCTTATCGTGTGACGTGGGACTACTATTTTCTGTCACGTGAGCATACACTCGAGTTCGATGAATGGAGTGGGAAAGCGGAGTACGAATATGTGAAACATAAAGGAGTTTCAATTTTTCTCATGGAAGCAGGAATGATAGGAACCCTGGAAGCATTATGGGAGGTCTTCCCTTTATTCACAAATACGGGTTGGGGGGAGAGTTCTAATCTTGCTTTTCTAAAGAAACATATGGGAGCTACTTTTGAAGCACGGCCCGAACCATGGGTAACAAACATAACCCAAGATGATATCCATTCAGGGGACTTCCTTGCAATATCAAAAATCCGTGGTAGATGGGGCGGGTTTGAGACCCTTGAAAAATGGGTATCCGGGTCATACGCAGGTCATTCTGCTGTTTGTTTGAGGGACCCGCAAGGAAAACTATGGGTTGGTGAATCTGGACATGAAGATGAAGAGGGCCAAGATGTTATTGCTTTGTTGCCATGGGATGAGTGGTGGGATTTTGAGTTGACTAAAGATGATGCTAATCCACATATTGCTTTGCTTCCTTTGCATCCCGATCTACGGTCTAGATTTAATGAAACTGCTGCTTGGGAGTATGCACAAAGTATGGTTGGGTTGCCATATGGTTATCATAACTTGATCTTTAGTTGGATAGATACTGTCAGTGATAATTACCCACCACCTTTGGATGCTAATCTGGTTGCATCTGTTATGACAGTGTGGGATCAAATGCAGCCTGCATATGCAGCTAATATGTGGAATGAAGCCTTGAATAAACGGCTTGGTACTGAGGGGCTTGAACTTGCTGATATTTTAGTGGAAGTTGAAAGGCGTGGTTCATCTTTTGCTGAATTACTGGCTATACCCGAACAAGATGATTGGGTATACGCTGATGGAAAGTCAACTTCTTGTGTTGCTTTCGTCCTTGAAATGTACAAAGAAGCGGGGCTTTTTGGAGATCTTGCAGACCAAATTCAAGTTACTGAGTTTACGATAAAGGACGCTTACACGCTCAACTTCTATGAAAACAATTCGAGCCGCCTGCCAAAGTGGTGTAATGAAGGCGACACACTTGACCTTCCATTTTGTCAAATCAAAGGAAAGTATCAAATGGAATTACCTGGATACAATACCATTGACCCGTACCCACATATGACAGAAAAATGCCCATCACTACCCCCAGATTATTCAAGACCCCAGTACTGCTGA 1236 43.04 MDIYVFATPYRVTWDYYFLSREHTLEFDEWSGKAEYEYVKHKGVSIFLMEAGMIGTLEALWEVFPLFTNTGWGESSNLAFLKKHMGATFEARPEPWVTNITQDDIHSGDFLAISKIRGRWGGFETLEKWVSGSYAGHSAVCLRDPQGKLWVGESGHEDEEGQDVIALLPWDEWWDFELTKDDANPHIALLPLHPDLRSRFNETAAWEYAQSMVGLPYGYHNLIFSWIDTVSDNYPPPLDANLVASVMTVWDQMQPAYAANMWNEALNKRLGTEGLELADILVEVERRGSSFAELLAIPEQDDWVYADGKSTSCVAFVLEMYKEAGLFGDLADQIQVTEFTIKDAYTLNFYENNSSRLPKWCNEGDTLDLPFCQIKGKYQMELPGYNTIDPYPHMTEKCPSLPPDYSRPQYC 411
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00422 411 Gene3D endopeptidase domain like (from Nostoc punctiforme) 98 340 - -
Fso2g00422 411 PANTHER OS01G0793500 PROTEIN 1 411 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00422 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
96298 Fso2g00422 Fso9g00244
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2607234 Fso Fso2g00422 Fso-Chr2:5741424 Fso7g00075 Fso-Chr7:823722
2778421 Fso Fso2g00422 Fso-Chr2:5741424 Fso9g00244 Fso-Chr9:4330719