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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00443 ATGAACTGGACTAAAGGCCCCGTCATCGGCCGCGGCTCCACCGCCACCGTCTCCCTCGCCACCACCGCCGCCGGAGACACCTTCGCCGTCAAGTCGTCGGAGCTTTCCAATTCATTGTTCTTACAGAAAGAGCAACAGTTTCTTTCCAAATTAACATCCCCTCATGTAATCAAGTACGTCGGATTTGATGTTGATTATGATCATCACGAGTATAATCTGTTCATGGAGTATGCACCCGGTGGGACGATTGCAGATGTGATTAAGAGACAAGGGGGTTTCTTGAAGAGTGTTTGA 294 49.66 MNWTKGPVIGRGSTATVSLATTAAGDTFAVKSSELSNSLFLQKEQQFLSKLTSPHVIKYVGFDVDYDHHEYNLFMEYAPGGTIADVIKRQGGFLKSV 97
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00443 97 Pfam Protein kinase domain 5 93 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Fso2g00443 97 SUPERFAMILY Protein kinase-like (PK-like) 2 90 IPR011009 -
Fso2g00443 97 ProSiteProfiles Protein kinase domain profile. 3 97 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Fso2g00443 97 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 2 92 IPR052751 GO:0004672(PANTHER)|GO:0006468(PANTHER)|GO:0007165(PANTHER)
Fso2g00443 97 ProSitePatterns Protein kinases ATP-binding region signature. 9 31 IPR017441 GO:0005524(InterPro)
Fso2g00443 97 Gene3D Transferase(Phosphotransferase) domain 1 1 96 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00443 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
95023 Fso11g00893 Fso2g00443
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr2:5908660 Fso6g02059 Fso-Chr6:48845936 dispersed
Fso Fso-Chr2:5908660 Fso2g00444 Fso-Chr2:5914814 tandem
Fso Fso-Chr11:9095678 Fso2g00443 Fso-Chr2:5908660 wgd
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Fso1g00022 . 83 461 MAP Kinase Kinase Kinase Protein gene family AT5G49470 53.264 4.90e-127 379.0
Fso1g00031 . 249 461 MAP Kinase Kinase Kinase Protein gene family AT5G49470 66.667 1.76e-104 308.0
Fso1g00033 . 408 469 MAP Kinase Kinase Kinase Protein gene family AT5G49470 67.742 2.15e-26 97.8
Fso1g00036 . 6 756 MAP Kinase Kinase Kinase Protein gene family AT3G06620 42.287 0.0 544.0
Fso1g00326 ACH 339 583 MAP Kinase Kinase Kinase Protein gene family AT4G08500 24.364 5.33e-08 54.3
Fso1g00605 . 5 479 MAP Kinase Kinase Kinase Protein gene family AT2G43850 75.579 0.0 756.0
Fso1g01974 . 7 525 MAP Kinase Kinase Kinase Protein gene family AT3G51630 55.345 0.0 587.0
Fso1g02249 . 9 378 MAP Kinase Kinase Kinase Protein gene family AT3G22750 75.661 0.0 607.0
Fso1g02499 ACH 43 564 MAP Kinase Kinase Kinase Protein gene family AT5G58350 52.641 0.0 531.0
Fso2g00200 . 3 340 MAP Kinase Kinase Kinase Protein gene family AT4G26890 48.986 4.33e-103 308.0
Fso2g00443 ACH 5 99 MAP Kinase Kinase Kinase Protein gene family AT5G55090 58.947 1.22e-33 118.0
Fso2g00444 . 6 369 MAP Kinase Kinase Kinase Protein gene family AT5G55090 50.269 9.66e-115 341.0
Fso2g00462 . 563 1146 MAP Kinase Kinase Kinase Protein gene family AT1G16270 55.778 0.0 668.0
Fso2g00566 . 15 292 MAP Kinase Kinase Kinase Protein gene family AT5G55560 80.576 9.39e-177 488.0
Fso2g00659 . 3 589 MAP Kinase Kinase Kinase Protein gene family AT4G08500 47.204 5.51e-158 464.0
Fso2g01697 WGDA 132 289 MAP Kinase Kinase Kinase Protein gene family AT5G50180 26.627 5.14e-08 53.5
Fso2g02556 . 52 122 MAP Kinase Kinase Kinase Protein gene family AT1G79570 35.0 2.70e-08 49.3
Fso2g02591 ACH,WGDA 130 336 MAP Kinase Kinase Kinase Protein gene family AT4G31170 30.088 1.06e-14 73.9
Fso2g02644 . 220 515 MAP Kinase Kinase Kinase Protein gene family AT1G53570 30.363 2.31e-35 138.0
Fso2g02822 . 46 805 MAP Kinase Kinase Kinase Protein gene family AT3G58640 54.651 0.0 808.0
Fso2g02853 . 9 438 MAP Kinase Kinase Kinase Protein gene family AT4G18950 65.207 0.0 581.0
Fso2g02928 . 188 432 MAP Kinase Kinase Kinase Protein gene family AT3G46930 26.316 3.60e-16 80.9
Fso2g03225 . 18 152 MAP Kinase Kinase Kinase Protein gene family AT5G57610 45.775 1.75e-29 119.0
Fso3g00369 WGDA 1 511 MAP Kinase Kinase Kinase Protein gene family AT3G48260 59.605 0.0 635.0
Fso3g00380 . 119 222 MAP Kinase Kinase Kinase Protein gene family AT1G04700 44.231 1.43e-23 95.5
Fso3g00789 . 309 558 MAP Kinase Kinase Kinase Protein gene family AT4G08470 29.31 1.84e-24 106.0
Fso3g01288 . 108 280 MAP Kinase Kinase Kinase Protein gene family AT5G50180 25.0 4.19e-08 53.9
Fso3g01812 WGDA 14 560 MAP Kinase Kinase Kinase Protein gene family AT5G41990 51.399 0.0 527.0
Fso3g02054 . 2 763 MAP Kinase Kinase Kinase Protein gene family AT3G06620 57.711 0.0 866.0
Fso3g02118 . 182 364 MAP Kinase Kinase Kinase Protein gene family AT3G63260 28.042 2.27e-20 92.0
Fso4g00241 WGDA 67 273 MAP Kinase Kinase Kinase Protein gene family AT3G06030 25.463 2.80e-13 70.1
Fso4g00927 WGDA 2 289 MAP Kinase Kinase Kinase Protein gene family AT5G55560 68.056 1.57e-155 435.0
Fso4g01084 WGDA 19 152 MAP Kinase Kinase Kinase Protein gene family AT5G57610 44.928 1.29e-31 126.0
Fso5g00221 . 10 103 MAP Kinase Kinase Kinase Protein gene family AT1G62400 52.632 6.62e-26 98.2
Fso5g00222 . 6 385 MAP Kinase Kinase Kinase Protein gene family AT5G50000 82.552 0.0 668.0
Fso5g00233 . 6 111 MAP Kinase Kinase Kinase Protein gene family AT5G50000 63.889 2.22e-38 130.0
Fso5g00239 . 10 304 MAP Kinase Kinase Kinase Protein gene family AT1G62400 62.162 1.03e-134 385.0
Fso5g01515 . 1 938 MAP Kinase Kinase Kinase Protein gene family AT4G24480 50.78 0.0 887.0
Fso5g01961 WGDA 23 435 MAP Kinase Kinase Kinase Protein gene family AT1G07150 41.394 1.21e-101 311.0
Fso5g02061 . 657 1037 MAP Kinase Kinase Kinase Protein gene family AT1G04700 66.142 7.49e-173 531.0
Fso6g00128 . 2 871 MAP Kinase Kinase Kinase Protein gene family AT1G63700 55.817 0.0 820.0
Fso6g00472 . 1 1368 MAP Kinase Kinase Kinase Protein gene family AT3G13530 70.943 0.0 1939.0
Fso6g00631 . 813 927 MAP Kinase Kinase Kinase Protein gene family AT1G08720 73.043 1.12e-56 187.0
Fso6g00692 ACH,WGDA 130 336 MAP Kinase Kinase Kinase Protein gene family AT4G31170 29.333 1.43e-13 70.5
Fso6g00752 ACH,WGDA 67 273 MAP Kinase Kinase Kinase Protein gene family AT3G06030 27.602 3.24e-12 66.6
Fso6g00998 . 1 412 MAP Kinase Kinase Kinase Protein gene family AT4G31170 75.359 0.0 644.0
Fso6g01262 . 275 537 MAP Kinase Kinase Kinase Protein gene family AT2G17700 32.721 4.17e-49 177.0
Fso6g01686 . 571 1146 MAP Kinase Kinase Kinase Protein gene family AT1G16270 58.906 0.0 689.0
Fso6g02017 . 10 289 MAP Kinase Kinase Kinase Protein gene family AT5G55560 70.714 6.50e-158 441.0
Fso6g02059 . 3 340 MAP Kinase Kinase Kinase Protein gene family AT4G26890 49.133 1.07e-109 326.0
Fso7g00031 WGDA 162 263 MAP Kinase Kinase Kinase Protein gene family AT1G16270 51.456 1.85e-28 110.0
Fso7g00187 WGDA 164 320 MAP Kinase Kinase Kinase Protein gene family AT1G79570 35.135 2.64e-24 107.0
Fso7g00545 . 52 444 MAP Kinase Kinase Kinase Protein gene family AT3G58760 44.14 3.63e-104 315.0
Fso7g00590 . 164 343 MAP Kinase Kinase Kinase Protein gene family AT1G16270 38.919 5.79e-27 114.0
Fso7g00754 . 7 434 MAP Kinase Kinase Kinase Protein gene family AT4G18950 66.282 0.0 580.0
Fso7g00863 . 1 525 MAP Kinase Kinase Kinase Protein gene family AT5G58950 55.701 0.0 586.0
Fso8g00298 . 1 412 MAP Kinase Kinase Kinase Protein gene family AT4G31170 74.402 0.0 635.0
Fso8g00408 . 1 639 MAP Kinase Kinase Kinase Protein gene family AT3G06030 58.358 0.0 698.0
Fso8g01264 . 5 974 MAP Kinase Kinase Kinase Protein gene family AT1G18160 53.443 0.0 925.0
Fso8g01944 ACH,WGDA 170 240 MAP Kinase Kinase Kinase Protein gene family AT2G35050 40.0 1.36e-12 60.5
Fso8g02171 ACH 75 175 MAP Kinase Kinase Kinase Protein gene family AT3G46920 50.495 2.62e-28 109.0
Fso9g00385 WGDA 1 501 MAP Kinase Kinase Kinase Protein gene family AT3G48260 59.108 0.0 623.0
Fso9g00884 . 83 166 MAP Kinase Kinase Kinase Protein gene family AT2G31800 36.905 9.82e-06 45.1
Fso9g01017 . 132 280 MAP Kinase Kinase Kinase Protein gene family AT5G50180 27.108 5.55e-08 53.1
Fso9g01229 WGDA 14 557 MAP Kinase Kinase Kinase Protein gene family AT5G41990 54.039 0.0 546.0
Fso9g01442 . 2 763 MAP Kinase Kinase Kinase Protein gene family AT3G06620 57.268 0.0 855.0
Fso10g00092 . 5 540 MAP Kinase Kinase Kinase Protein gene family AT4G38470 61.439 0.0 666.0
Fso10g01758 . 60 805 MAP Kinase Kinase Kinase Protein gene family AT3G58640 54.941 0.0 813.0
Fso10g01854 . 23 152 MAP Kinase Kinase Kinase Protein gene family AT5G57610 47.482 3.30e-28 115.0
Fso10g01959 . 1 329 MAP Kinase Kinase Kinase Protein gene family AT1G62400 89.091 0.0 617.0
Fso10g02000 . 173 607 MAP Kinase Kinase Kinase Protein gene family AT5G66850 59.645 8.69e-170 497.0
Fso10g02499 ACH 165 320 MAP Kinase Kinase Kinase Protein gene family AT1G79570 34.857 1.84e-25 108.0
Fso10g02568 . 88 399 MAP Kinase Kinase Kinase Protein gene family AT3G01490 46.667 1.64e-89 273.0
Fso10g02576 . 69 380 MAP Kinase Kinase Kinase Protein gene family AT5G50000 48.265 4.72e-103 307.0
Fso10g02651 . 1 928 MAP Kinase Kinase Kinase Protein gene family AT1G08720 54.236 0.0 946.0
Fso10g02781 . 1 355 MAP Kinase Kinase Kinase Protein gene family AT3G27560 74.309 0.0 547.0
Fso10g02854 . 12 411 MAP Kinase Kinase Kinase Protein gene family AT3G01490 75.862 0.0 625.0
Fso10g03104 ACH 1 344 MAP Kinase Kinase Kinase Protein gene family AT5G67080 49.315 1.01e-112 330.0
Fso10g03196 . 120 267 MAP Kinase Kinase Kinase Protein gene family AT1G04700 37.037 8.09e-25 102.0
Fso10g03261 . 23 155 MAP Kinase Kinase Kinase Protein gene family AT5G57610 42.446 1.77e-24 105.0
Fso10g03383 . 221 592 MAP Kinase Kinase Kinase Protein gene family AT4G08500 55.67 2.74e-138 412.0
Fso10g03744 . 6 385 MAP Kinase Kinase Kinase Protein gene family AT5G50000 81.89 0.0 655.0
Fso10g03745 . 11 304 MAP Kinase Kinase Kinase Protein gene family AT1G62400 63.176 4.69e-140 399.0
Fso10g03770 . 3 346 MAP Kinase Kinase Kinase Protein gene family AT5G50180 74.128 0.0 549.0
Fso10g03900 . 1 276 MAP Kinase Kinase Kinase Protein gene family AT5G67080 42.657 7.47e-72 227.0
Fso11g00187 WGDA 67 273 MAP Kinase Kinase Kinase Protein gene family AT3G06030 26.389 3.42e-14 73.2
Fso11g00205 . 406 655 MAP Kinase Kinase Kinase Protein gene family AT1G63700 27.451 1.75e-25 112.0
Fso11g00382 . 2 724 MAP Kinase Kinase Kinase Protein gene family AT4G23050 42.25 0.0 545.0
Fso11g00745 . 1 878 MAP Kinase Kinase Kinase Protein gene family AT5G11850 53.575 0.0 877.0
Fso11g00795 . 542 1147 MAP Kinase Kinase Kinase Protein gene family AT1G16270 60.835 0.0 674.0
Fso11g00893 ACH 8 344 MAP Kinase Kinase Kinase Protein gene family AT5G55090 49.438 2.90e-111 330.0
Fso11g01099 WGDA 15 289 MAP Kinase Kinase Kinase Protein gene family AT5G55560 71.636 4.41e-159 444.0
Fso11g01157 . 1 296 MAP Kinase Kinase Kinase Protein gene family AT1G05100 52.685 1.47e-100 298.0
Fso11g01272 WGDA 18 153 MAP Kinase Kinase Kinase Protein gene family AT5G57610 43.571 3.42e-30 123.0
Fso11g01476 . 221 591 MAP Kinase Kinase Kinase Protein gene family AT4G08500 58.933 8.12e-142 419.0
Fso11g02079 . 282 550 MAP Kinase Kinase Kinase Protein gene family AT4G35780 38.328 3.87e-55 190.0
Fso12g00071 WGDA 24 124 MAP Kinase Kinase Kinase Protein gene family AT5G57610 49.505 3.87e-26 104.0
Fso12g00199 ACH,WGDA 158 320 MAP Kinase Kinase Kinase Protein gene family AT1G79570 34.637 3.57e-25 109.0
Fso12g00708 . 1 502 MAP Kinase Kinase Kinase Protein gene family AT5G58950 56.36 0.0 587.0
Fso12g00863 . 1 809 MAP Kinase Kinase Kinase Protein gene family AT3G58640 66.223 0.0 1089.0
Fso12g01943 . 25 378 MAP Kinase Kinase Kinase Protein gene family AT3G22750 78.151 0.0 604.0
Fso12g02144 . 29 479 MAP Kinase Kinase Kinase Protein gene family AT2G43850 71.619 0.0 685.0
Fso12g02468 . 1 810 MAP Kinase Kinase Kinase Protein gene family AT5G03730 56.777 0.0 803.0
Fso12g02554 . 313 466 MAP Kinase Kinase Kinase Protein gene family AT5G49470 70.779 3.26e-85 256.0
Fso13g00174 . 3 871 MAP Kinase Kinase Kinase Protein gene family AT1G63700 57.432 0.0 853.0
Fso13g01002 . 1 436 MAP Kinase Kinase Kinase Protein gene family AT4G38470 68.68 0.0 590.0
Fso13g01003 . 454 569 MAP Kinase Kinase Kinase Protein gene family AT4G35780 72.414 1.49e-57 184.0
Fso13g01245 . 1 699 MAP Kinase Kinase Kinase Protein gene family AT3G04910 52.924 0.0 641.0
Fso13g01276 . 157 376 MAP Kinase Kinase Kinase Protein gene family AT4G31170 30.142 1.05e-21 97.4
Fso13g01400 . 26 588 MAP Kinase Kinase Kinase Protein gene family AT4G08500 48.148 1.13e-147 434.0
Fso13g01831 . 270 540 MAP Kinase Kinase Kinase Protein gene family AT4G38470 28.378 1.51e-23 103.0
Fso13g02064 . 1 412 MAP Kinase Kinase Kinase Protein gene family AT4G31170 75.12 0.0 641.0
Fso13g02254 . 25 77 MAP Kinase Kinase Kinase Protein gene family AT3G04910 66.667 7.75e-14 64.7
Fso13g02261 . 40 188 MAP Kinase Kinase Kinase Protein gene family AT3G04910 46.667 1.05e-25 100.0
Fso13g02269 . 40 77 MAP Kinase Kinase Kinase Protein gene family AT3G04910 76.923 9.65e-13 61.2
Fso14g00391 ACH,WGDA 163 307 MAP Kinase Kinase Kinase Protein gene family AT1G16270 39.073 7.60e-27 112.0
Fso14g00500 . 8 437 MAP Kinase Kinase Kinase Protein gene family AT1G14000 81.86 0.0 718.0
Fso14g01538 . 309 558 MAP Kinase Kinase Kinase Protein gene family AT4G08470 29.492 2.88e-24 106.0
Fso14g02085 WGDA 23 366 MAP Kinase Kinase Kinase Protein gene family AT1G07150 45.856 2.93e-92 286.0
Fso14g02323 ACH 67 273 MAP Kinase Kinase Kinase Protein gene family AT3G06030 29.167 2.02e-15 77.0
Fso14g02509 . 219 448 MAP Kinase Kinase Kinase Protein gene family AT4G08470 26.809 1.16e-09 58.9
Fso14g02518 . 2 333 MAP Kinase Kinase Kinase Protein gene family AT5G01850 77.745 0.0 528.0
Fso15g01002 . 72 329 MAP Kinase Kinase Kinase Protein gene family AT3G06030 25.0 1.02e-18 89.4
Fso15g01038 . 1 569 MAP Kinase Kinase Kinase Protein gene family AT4G35780 68.158 0.0 785.0
Fso15g01901 . 2 779 MAP Kinase Kinase Kinase Protein gene family AT1G63700 54.304 0.0 707.0
Fso15g02312 ACH 72 175 MAP Kinase Kinase Kinase Protein gene family AT3G46920 47.115 8.34e-29 110.0
Fso15g02413 . 1 1368 MAP Kinase Kinase Kinase Protein gene family AT3G13530 69.596 0.0 1888.0
Fso15g02727 . 12 438 MAP Kinase Kinase Kinase Protein gene family AT1G14000 79.391 0.0 705.0
Fso16g00814 ACH,WGDA 2 344 MAP Kinase Kinase Kinase Protein gene family AT5G67080 45.283 3.34e-99 296.0
Fso16g01709 . 1 553 MAP Kinase Kinase Kinase Protein gene family AT1G53570 54.561 0.0 554.0
Fso16g01790 . 1 821 MAP Kinase Kinase Kinase Protein gene family AT5G03730 62.089 0.0 963.0
Fso17g00929 . 208 811 MAP Kinase Kinase Kinase Protein gene family AT5G03730 46.711 0.0 546.0
Fso17g01290 . 1 66 MAP Kinase Kinase Kinase Protein gene family AT5G67080 40.58 3.55e-09 49.3
Fso17g01360 . 53 425 MAP Kinase Kinase Kinase Protein gene family AT3G58760 34.026 1.30e-62 206.0
Fso17g01453 . 221 592 MAP Kinase Kinase Kinase Protein gene family AT4G08500 55.556 2.93e-133 398.0
Fso17g01656 . 11 304 MAP Kinase Kinase Kinase Protein gene family AT1G62400 63.514 8.26e-138 394.0
Fso18g00528 . 5 991 MAP Kinase Kinase Kinase Protein gene family AT1G18160 55.633 0.0 1006.0
Fso18g01193 . 1 609 MAP Kinase Kinase Kinase Protein gene family AT1G53570 53.481 0.0 597.0
Fso18g01755 . 220 471 MAP Kinase Kinase Kinase Protein gene family AT1G53570 30.196 3.60e-34 135.0
Fso18g02134 ACH,WGDA 1 336 MAP Kinase Kinase Kinase Protein gene family AT4G36950 51.714 3.22e-115 335.0
Fso18g02301 . 1 353 MAP Kinase Kinase Kinase Protein gene family AT5G40540 76.685 0.0 563.0
Fso18g02891 . 24 108 MAP Kinase Kinase Kinase Protein gene family AT5G57610 38.824 2.57e-14 67.0
Fso10000858.1g00004 . 60 805 MAP Kinase Kinase Kinase Protein gene family AT3G58640 54.809 0.0 812.0
Fso10000546.1g00004 . 21 191 MAP Kinase Kinase Kinase Protein gene family AT3G13530 60.819 9.42e-61 200.0
Fso10000148.1g00005 . 175 260 MAP Kinase Kinase Kinase Protein gene family AT2G35050 55.814 1.49e-28 106.0
Fso10001174.1g00002 . 165 369 MAP Kinase Kinase Kinase Protein gene family AT1G79570 32.877 1.32e-25 108.0
Fso10000271.1g00006 . 309 558 MAP Kinase Kinase Kinase Protein gene family AT4G08470 29.31 1.84e-24 106.0
Fso10000126.1g00004 . 6 372 MAP Kinase Kinase Kinase Protein gene family AT5G55090 48.312 6.19e-111 332.0
Fso10000126.1g00005 . 6 99 MAP Kinase Kinase Kinase Protein gene family AT5G55090 59.574 2.47e-32 115.0
Fso10000714.1g00001 . 513 631 MAP Kinase Kinase Kinase Protein gene family AT5G66850 32.231 6.23e-12 62.0
Fso10000860.1g00003 . 295 632 MAP Kinase Kinase Kinase Protein gene family AT5G66850 63.824 9.61e-151 452.0
Fso10000244.1g00001 . 33 548 MAP Kinase Kinase Kinase Protein gene family AT4G35780 50.382 8.86e-175 504.0
Fso10001200.1g00002 . 3 509 MAP Kinase Kinase Kinase Protein gene family AT3G48260 57.519 0.0 588.0
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Fso Pkinase 2e-10 CL0016 PK STE_STE11