AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso2g00474 ATGTCGGAATACAGCACCGTTAGTACAGCCAGCATGCCGGATCTCAACCTACCTGATGAAATTCTATCAGTAATCCCTACGGATCCGTACGATCAGTTAGATCTTGCTCGGAAGATCACTTCAATGGCGCTTGCGTCACGCGTTTCGAAGCTGGAGGCGGAGGCGGTGAGGCTGAGGCAGAAGTTGAGTGAGAAGGATCGTGTGGTGATGGAGCTTGAAGAGAAGGTGTCGGAGCTTCAGCAGACGTGTCATAGTGTTCAGATGCGGTTGCAGATTGCGGTTGAGGATAATAGGAAGGTTGTGGAGGAGAGAGATGCGTTGGCTGTGGCTTCTAAGAAATTAGGGCGCGATTTAGCTAAGCTTGAGGCATTCAAACGGCAACTAATGCAGTCATTGAACGACAACGATTCAAATCTTCATCCGGCAGCAACTGTAGACTTAGGCACCTATGACCAATCTGCTCCCAAAGCTCATCCGGTGAAAGAAGAGGAGACAAATGGCTATAGAAGGCACCATTCTTATAGTGGTTCTATTGATAGTGGAAACATACATGATGACGTCTCGAAGCTTGCCAGTCAAAGGTTTTCTGTGACCCCGTATATCAGCACACGTGTAACTCCATCTGCAACTCCCAAAACAATCTCTGCAAGTGCGTCTCCTAGAAGGTATTCTGCTTCTGGTGCTACATCCCCAACAAAATATAAATATGATGGTCGTACCTCAATGTCGTCATGGTACCCCTCAAGTCAGCAATCTTCAGCTGGAAACTCTCCTCCTCGTGGGCCCCCAATACCAGGCCGTGCTACTAAGATTGATGGAAAGGAGGTCTTCCGTCAAGCAAGGAGTCGACTATCTTATGAGCAGTTCAGTGCTTTTTTAGCAAATATAAAGGAGTTAAATGCTCAGAAGCAATCTCGTGAGGAGACTTTGAGGAAGGCAGAAGAAATATTCGGGTCTGATAACAAGGATCTTTATCTATCATTTCAAGCTCTACTAACTCGCAACAAACAATGA 1014 46.55 MSEYSTVSTASMPDLNLPDEILSVIPTDPYDQLDLARKITSMALASRVSKLEAEAVRLRQKLSEKDRVVMELEEKVSELQQTCHSVQMRLQIAVEDNRKVVEERDALAVASKKLGRDLAKLEAFKRQLMQSLNDNDSNLHPAATVDLGTYDQSAPKAHPVKEEETNGYRRHHSYSGSIDSGNIHDDVSKLASQRFSVTPYISTRVTPSATPKTISASASPRRYSASGATSPTKYKYDGRTSMSSWYPSSQQSSAGNSPPRGPPIPGRATKIDGKEVFRQARSRLSYEQFSAFLANIKELNAQKQSREETLRKAEEIFGSDNKDLYLSFQALLTRNKQ 337
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso2g00474 337 MobiDBLite consensus disorder prediction 156 170 - -
Fso2g00474 337 MobiDBLite consensus disorder prediction 206 257 - -
Fso2g00474 337 Coils Coil 41 89 - -
Fso2g00474 337 Coils Coil 296 316 - -
Fso2g00474 337 MobiDBLite consensus disorder prediction 206 272 - -
Fso2g00474 337 PANTHER OS03G0659800 PROTEIN 14 335 - -
Fso2g00474 337 MobiDBLite consensus disorder prediction 151 182 - -
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso2g00474 - -
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr2:6265514 Fso4g00634 Fso-Chr4:8625270 dispersed
Fso Fso-Chr2:6265514 Fso3g01695 Fso-Chr3:44843428 transposed