AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Fso6g01674 ATGGCTGGCAATGGCATGTCAAACTTAGGCCGTGTGAAGCTCACAGACTTGATAGCTTCTGAAGGACTTCCTTCTGATACATACAAACTATCAGTCTCAACTTTGTCACAATCACTTGCTCAATATTCGGCCGCCATCATCCAATTTCCAGCAAACGATGGTGCTCTTTTGAGATGTTGCCTGGAATCTGCTCGACCATACTTTCATCAAAAACCCTCATACCCATCTGCTGATATGATTCACATTAATGATTCCCGTGAATGGTGTAAAACATCAGGATACTCAGCAGATCCCCAAATGTGGCAAGAAAGTTATGATTACAGGCCAGGAATAACTCCCACGGAACCCAACAATGACATTGAATTCCCTCCTGCTGGGTTAGCTGATATATTTGTTCTACTTGCAAAAGCAGCCCGTGGTGTACTTGATGCAGTTAGTTTCTATTTAAATCTACGTGGCTGTGCCTTCACTGAAATACTTGATAGTGTTCCCTTGAGAAATCGGGAAATATCATCTTCGGTTCTATCAGTTAATTGTCATGCAAGGCCCTCTTTTCAAGGAGCTCAACACCATAACTTAACAACCCAAGAAGACGGGCAATTAGTTATGTTCTCGGACCATGATCAACAAGTTGACAAAAGTGTAGTATCTATAATAAAATCTGATAAAGCCGGCTTTCATATTAGAGATTTTAATGGTCGTTGGGTGCTTGTGGATGGTGATCTTGGTCCTCAAGAAGCGGTTGTGTACCCTGGACTGGCTTTGTATCATGCTACTGCTGGCTATGTTAGCCCTGCATTGCATAGAACTGATATTGGTAACTTACATGGTAACATGTATGGGCGGTGCTCTCTCTCTTTTAAACTCATGCCTAAATCCATGACTAGCCTTAGTTGTTCCGAGATGAGAGCTGCTGGTCATGGTGTTGAACCTCAGTTCCAGATTCCAGTATCAGTTGATGACTTTATGCAGAGATCACATCCGTTGGATCAACTCTTTAACAGAAACAGTTTCCCAAGTTTTAGTTTTCCTACAGCCCAAGAAGGATCTATGAAACCCTTGATGAAGAGAAAGAAGACCAATTCTAGGTTGAAACCGTTGCCACCTTCCAAAAGGTTACGGCTTGAAGCTCAAAGAGTTCTTAAAGAGAGAGTTCAGGATATAGCTGATAAGAAAGGCATCAAGCTCAGATTCTGCACATTGAAGGAATGTGAGAGTCACATTCACTCACTTGACAGTCCATGTGGCAACATACGATTGGAGATTGGGTGGCCCCCGGGTGTGCCATTTGTTCATCCCCATGACCTACCCAACAAAGCAAAGATTGGGTTTCTTGAAACATATGAACCTGGTTGGTCAGCCAATCATGATATGGAGCTGAGTTTGATTGAAACTGGACAGCCAAGTCAGCATGCTGATAACTAA 1425 42.81 MAGNGMSNLGRVKLTDLIASEGLPSDTYKLSVSTLSQSLAQYSAAIIQFPANDGALLRCCLESARPYFHQKPSYPSADMIHINDSREWCKTSGYSADPQMWQESYDYRPGITPTEPNNDIEFPPAGLADIFVLLAKAARGVLDAVSFYLNLRGCAFTEILDSVPLRNREISSSVLSVNCHARPSFQGAQHHNLTTQEDGQLVMFSDHDQQVDKSVVSIIKSDKAGFHIRDFNGRWVLVDGDLGPQEAVVYPGLALYHATAGYVSPALHRTDIGNLHGNMYGRCSLSFKLMPKSMTSLSCSEMRAAGHGVEPQFQIPVSVDDFMQRSHPLDQLFNRNSFPSFSFPTAQEGSMKPLMKRKKTNSRLKPLPPSKRLRLEAQRVLKERVQDIADKKGIKLRFCTLKECESHIHSLDSPCGNIRLEIGWPPGVPFVHPHDLPNKAKIGFLETYEPGWSANHDMELSLIETGQPSQHADN 474
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Fso6g01674 474 Gene3D - 25 328 IPR027443 -
Fso6g01674 474 SUPERFAMILY Clavaminate synthase-like 97 324 - -
Fso6g01674 474 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 3 472 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Fso6g01674 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Fso Fso-Chr6:38516672 Fso7g00348 Fso-Chr7:4524016 dispersed