AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr12g02550 ATGGAGGATGAGTATGCAAAACTTATCAGGAGGATGAATCCACCCAGAGTTACAATCGACAACGATTCGTCCTCAGATGCAACAGTTATCCAGGTTGAAAGTGTTAATAAGCATGGTAGTCTGCTGGAAGTTGTGCAAGTTCTTGCGGATTTAGATCTTGTTATTAAAAAAGCTTATATTTCATCAGATGCTGGATGGTTCATGGATGTGTTCAATGTTATATGCAATGACGGAAGCAAAATTAGAGATGATGGGGTAGTCAGTTATATAAAACAGGTGCTTGAAAGTGATGCATTTTACGTACCATCACTGAATGGTTCAGTTGGATTGAAGCCATCGGATGATTACACCGTAATAGAACTAGTCGGAACAGACAGACCTGGATTATTATCTGAAGTGTCTGCAGTTCTAACAAACCTTGGTTGTAATGTGCTCAATGCTGAAATATGGACTCACAATGCCAGAGCTGCGGCTGTGGTACATGTCACAGATGATAAAACAAAGTGTGCAGTTGAAGACCCAAAGCGGCTCTTGACTATTAAGAAGCTTCTTTGTAACCTTCTCAAGGGAAACAATGATTTGAAGACTGCAAAAATGACACTTTCCACCCCTGGTTCTATGCATAGACAGAGAAGATTACATCAAATTATGTTTGCTGAGAGGGATTACGAGAAAGTTGAAGAAACAGAACCAGAAAAGGAAAATAAGTTGAGAACACAGGTTACGGTTTTAGATTGTGTTGAGAAGGATTACACAGTTGTTACCATGCATTGTAGGGATAGACCAAAGCTGTTGTTTGATATTATTTGCACTCTTACCGACATGGAATATGTAGTCTTTCATGGAGTGGTTCACACAGGGAAAACGGAGGCTTTTCAGGAATATTACATTCGGCATGTTGATGGGAGTCCAGTAAGCTCAGAGGCAGAGCGAGAGCGTGTTATGCAATGTCTTGAAGCTGCAATTGAGAGGAGGACATCTGAGTTTATAAATTCTTGA 999 40.24 MEDEYAKLIRRMNPPRVTIDNDSSSDATVIQVESVNKHGSLLEVVQVLADLDLVIKKAYISSDAGWFMDVFNVICNDGSKIRDDGVVSYIKQVLESDAFYVPSLNGSVGLKPSDDYTVIELVGTDRPGLLSEVSAVLTNLGCNVLNAEIWTHNARAAAVVHVTDDKTKCAVEDPKRLLTIKKLLCNLLKGNNDLKTAKMTLSTPGSMHRQRRLHQIMFAERDYEKVEETEPEKENKLRTQVTVLDCVEKDYTVVTMHCRDRPKLLFDIICTLTDMEYVVFHGVVHTGKTEAFQEYYIRHVDGSPVSSEAERERVMQCLEAAIERRTSEFINS 332
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr12g02550 332 Gene3D - 114 183 - -
Ftr12g02550 332 ProSiteProfiles ACT domain profile. 118 199 IPR002912 -
Ftr12g02550 332 SUPERFAMILY ACT-like 24 93 IPR045865 -
Ftr12g02550 332 Pfam ACT domain 117 166 IPR002912 -
Ftr12g02550 332 SUPERFAMILY ACT-like 113 173 IPR045865 -
Ftr12g02550 332 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 7 328 IPR040217 -
Ftr12g02550 332 CDD ACT-ACR-3 251 325 - -
Ftr12g02550 332 ProSiteProfiles ACT domain profile. 29 107 IPR002912 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr12g02550 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr12:88976482 Ftr1g02368 Ftr-Chr1:84307936 dispersed
Ftr Ftr-Chr12:88976482 Ftr7g02658 Ftr-Chr7:101646607 transposed