Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ftr12g02550 | ATGGAGGATGAGTATGCAAAACTTATCAGGAGGATGAATCCACCCAGAGTTACAATCGACAACGATTCGTCCTCAGATGCAACAGTTATCCAGGTTGAAAGTGTTAATAAGCATGGTAGTCTGCTGGAAGTTGTGCAAGTTCTTGCGGATTTAGATCTTGTTATTAAAAAAGCTTATATTTCATCAGATGCTGGATGGTTCATGGATGTGTTCAATGTTATATGCAATGACGGAAGCAAAATTAGAGATGATGGGGTAGTCAGTTATATAAAACAGGTGCTTGAAAGTGATGCATTTTACGTACCATCACTGAATGGTTCAGTTGGATTGAAGCCATCGGATGATTACACCGTAATAGAACTAGTCGGAACAGACAGACCTGGATTATTATCTGAAGTGTCTGCAGTTCTAACAAACCTTGGTTGTAATGTGCTCAATGCTGAAATATGGACTCACAATGCCAGAGCTGCGGCTGTGGTACATGTCACAGATGATAAAACAAAGTGTGCAGTTGAAGACCCAAAGCGGCTCTTGACTATTAAGAAGCTTCTTTGTAACCTTCTCAAGGGAAACAATGATTTGAAGACTGCAAAAATGACACTTTCCACCCCTGGTTCTATGCATAGACAGAGAAGATTACATCAAATTATGTTTGCTGAGAGGGATTACGAGAAAGTTGAAGAAACAGAACCAGAAAAGGAAAATAAGTTGAGAACACAGGTTACGGTTTTAGATTGTGTTGAGAAGGATTACACAGTTGTTACCATGCATTGTAGGGATAGACCAAAGCTGTTGTTTGATATTATTTGCACTCTTACCGACATGGAATATGTAGTCTTTCATGGAGTGGTTCACACAGGGAAAACGGAGGCTTTTCAGGAATATTACATTCGGCATGTTGATGGGAGTCCAGTAAGCTCAGAGGCAGAGCGAGAGCGTGTTATGCAATGTCTTGAAGCTGCAATTGAGAGGAGGACATCTGAGTTTATAAATTCTTGA | 999 | 40.24 | MEDEYAKLIRRMNPPRVTIDNDSSSDATVIQVESVNKHGSLLEVVQVLADLDLVIKKAYISSDAGWFMDVFNVICNDGSKIRDDGVVSYIKQVLESDAFYVPSLNGSVGLKPSDDYTVIELVGTDRPGLLSEVSAVLTNLGCNVLNAEIWTHNARAAAVVHVTDDKTKCAVEDPKRLLTIKKLLCNLLKGNNDLKTAKMTLSTPGSMHRQRRLHQIMFAERDYEKVEETEPEKENKLRTQVTVLDCVEKDYTVVTMHCRDRPKLLFDIICTLTDMEYVVFHGVVHTGKTEAFQEYYIRHVDGSPVSSEAERERVMQCLEAAIERRTSEFINS | 332 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ftr12g02550 | 332 | Gene3D | - | 114 | 183 | - | - | |
| Ftr12g02550 | 332 | ProSiteProfiles | ACT domain profile. | 118 | 199 | IPR002912 | - | |
| Ftr12g02550 | 332 | SUPERFAMILY | ACT-like | 24 | 93 | IPR045865 | - | |
| Ftr12g02550 | 332 | Pfam | ACT domain | 117 | 166 | IPR002912 | - | |
| Ftr12g02550 | 332 | SUPERFAMILY | ACT-like | 113 | 173 | IPR045865 | - | |
| Ftr12g02550 | 332 | PANTHER | ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED | 7 | 328 | IPR040217 | - | |
| Ftr12g02550 | 332 | CDD | ACT-ACR-3 | 251 | 325 | - | - | |
| Ftr12g02550 | 332 | ProSiteProfiles | ACT domain profile. | 29 | 107 | IPR002912 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ftr12g02550 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ftr | Ftr-Chr12:88976482 | Ftr1g02368 | Ftr-Chr1:84307936 | dispersed | |
| Ftr | Ftr-Chr12:88976482 | Ftr7g02658 | Ftr-Chr7:101646607 | transposed |