Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ftr12g02553 | ATGAAGGTCTATAAGGAGAATTCGATTCTTTCGTTCAACAACGCTGCTAATCATCCTCTAGATTACATTGAATTTGATGTTCAGGTGACAAAAGACGACACACCAGTGATCTTTCACGACAATTTCATCCTCTCTGAAGAGAATGGTAACATAGTTGAAAAACGAGTCACCGATTTGACTTTGGATGAGTTCTTCAGTTATGGTCCTCAACGCGAAACAGGTCGGGTGGGAAAAACATTGCTGAGAAGATCAAACGGAAAGATTGTCGGGTGGGACGTTGAGATCGATGATCATTCTTGCACCCTTGAAGAAGCATTCCAGAAAGTGAACCCTTGTTTGGGATTTAACATCGAGTTGAAATTTGATGATTACATTGTTTATGAAGAAGAGTATCTCATTCATGTTCTTCAAGTTATCTTAAAGGTGGTGTATGAAAACGCCCAAGAAAGACCTGTACTTTTCTCAAGCTTCCAGCCTGATGTGGCCTTGCTTATGAAGAAACTTCAACATAAATACCCGGTGTACTTCTTGACAAACGGCGGAAATGAGATATTCGATGACGTTCGAATGAACTCGTTAGAAGAAGCGAAGAAGCTGGCCATATCGGGCGGTTTGGACGGAGTTGTTTCGGAAGTAAAGGGTATATTTAGAAACCCTTCAGTAGTAAGAGAGATCAAAGAATCAAATCTCTCCCTCCTTACTTATGGCAAACTAAATAACGTCCCTGAAGCCGTACACGTCCAATATCTTATGGGCGTCGAGGGTGTCATTGTTGATCTAGTACAAGAAATTACAAGCGCAGTTGCAGTTTTAAAAACAGGATTTGAAGGAGAGGAAGGAGGATCACAGGTGAAAGAGAACAGCGGCAAGATCGAACTGCCGTTCTTGCTGAGTTTGATTTCACAAGTGATTCAGCATTGA | 921 | 41.48 | MKVYKENSILSFNNAANHPLDYIEFDVQVTKDDTPVIFHDNFILSEENGNIVEKRVTDLTLDEFFSYGPQRETGRVGKTLLRRSNGKIVGWDVEIDDHSCTLEEAFQKVNPCLGFNIELKFDDYIVYEEEYLIHVLQVILKVVYENAQERPVLFSSFQPDVALLMKKLQHKYPVYFLTNGGNEIFDDVRMNSLEEAKKLAISGGLDGVVSEVKGIFRNPSVVREIKESNLSLLTYGKLNNVPEAVHVQYLMGVEGVIVDLVQEITSAVAVLKTGFEGEEGGSQVKENSGKIELPFLLSLISQVIQH | 306 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ftr12g02553 | 306 | Pfam | Glycerophosphoryl diester phosphodiesterase family | 4 | 261 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Ftr12g02553 | 306 | ProSiteProfiles | GP-PDE domain profile. | 1 | 268 | IPR030395 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Ftr12g02553 | 306 | PANTHER | GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE | 4 | 269 | IPR051578 | GO:0046475(PANTHER) | |
| Ftr12g02553 | 306 | Gene3D | Phosphatidylinositol (PI) phosphodiesterase | 1 | 269 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) | |
| Ftr12g02553 | 306 | SUPERFAMILY | PLC-like phosphodiesterases | 3 | 262 | IPR017946 | GO:0006629(InterPro)|GO:0008081(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ftr12g02553 | K18696 | glycerophosphodiester phosphodiesterase [EC:3.1.4.46] |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ftr | Ftr-Chr12:89024408 | Ftr15g02259 | Ftr-Chr15:82920553 | dispersed |