AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr15g00588 ATGGCTGGCAATGGCCTGTCAAACTTAGGCCGTGTGAAGCTCACAGACTTGATAGCTTCTGAAGGACTTCCTTCTGATACATACAAACTATCAGTCTCAACTTTGTCACAATCACTTGCTCAATATTCGGCCGCCATCATCCAATTTCCAGCAAATGATGGTGCCCTTTTGAGATGTTGCCTGGAATCTGCTCGACCATACTTTCATCAAAAACCCTCATACCCATCTGCCGATATGATTCACATTAATGATTCCCGTGAATGGTGTAAAACATCAGGATACTCAGCAGATCCCCAAATGTGGCAAGAAAGTTATGATTACAGGCCAGGAATAACTCCCACAGAACCCAACAATGACATTGAATTCCCTCCTGCTGGGTTAGCTGATATATTTGTTCTACTTGCAAAAGCAGCCCGTGGTGTACTTGATGCAGTTAGTTTCTATTTAAATCTACGTGGCTGTGCCTTCACTGAAATACTTGATAGTGTTCCCTTGAGAAATCGGGAAATATCATCTTCGGTTCTATCAGTTAATTGTCATGCAAGGCCTTCTTTTCAAGGAGCTCAACACCACAACTTAACAACCCAAGAAGACGGCCAATTAGTTATGTTCTCGGACCATGATCAACAAGTTGACAAAAGTGTAGTATCTATAATAAAATCTGATAAAGCCGGCTTTCATATTAGAGATTTTAATGGTCGTTGGGTGCTTGTGGATGGTGATCTTGGTCCTCAAGAAGCGGTTGTGTACCCTGGACTGGCTTTGTATCATGCTACTGCTGGCTATGTTAGCCCTGCACTGCATAGAACTGATATTAGTAACTTACATGCTAACATGTATGGGCGGTGCTCGCTCTCTTTTAAACTCATGCCTAAATCCATGACTAGCCTTAGTTGTTCAGAGATGAGAGCTGCTGGTCATGGTGTTGAAGCTCAGTTCCAGATTCCAGTATCAGTTGATGACTTTATGCAGAGATCACATCCGTTGGATCAACTCTTTAACAGAAACAGTTTCCCAAGTTTTAGTTATCCTACAGCCCAAGAAGGATCTATGAAACCCTTGATGAAGAGAAAGAAGACCAGTTCAAGCTTGAAACCGTTGCCACCTTCCAAAAGGTTACGGCTTGAAGCTCAAAGAGTTCTTAAAGAGCGAGTTCAGGATATAGCTGATAAGAAAGGCATCAAGCTCAGATTCTGCACATTGAAGGAATGTGAGAGTCACATTCACTCACTTGACAGTCCATGTGGCAACATACGATTGGAGATTGGGTGGCCCCCGGGTGTGCCATTTGTTCATCCCCATGACCTACCCAACAAAGCAAAGATTGGATTTCTTGAAACATATGAACCTGGTTGGTCAGCCAATCATGATATGGAGCTGAGTTTGATTGAAACTGGACAGCCAAGTCAGCATGCTGATAACTAA 1425 42.95 MAGNGLSNLGRVKLTDLIASEGLPSDTYKLSVSTLSQSLAQYSAAIIQFPANDGALLRCCLESARPYFHQKPSYPSADMIHINDSREWCKTSGYSADPQMWQESYDYRPGITPTEPNNDIEFPPAGLADIFVLLAKAARGVLDAVSFYLNLRGCAFTEILDSVPLRNREISSSVLSVNCHARPSFQGAQHHNLTTQEDGQLVMFSDHDQQVDKSVVSIIKSDKAGFHIRDFNGRWVLVDGDLGPQEAVVYPGLALYHATAGYVSPALHRTDISNLHANMYGRCSLSFKLMPKSMTSLSCSEMRAAGHGVEAQFQIPVSVDDFMQRSHPLDQLFNRNSFPSFSYPTAQEGSMKPLMKRKKTSSSLKPLPPSKRLRLEAQRVLKERVQDIADKKGIKLRFCTLKECESHIHSLDSPCGNIRLEIGWPPGVPFVHPHDLPNKAKIGFLETYEPGWSANHDMELSLIETGQPSQHADN 474
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr15g00588 474 SUPERFAMILY Clavaminate synthase-like 97 302 - -
Ftr15g00588 474 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 3 472 - -
Ftr15g00588 474 Gene3D - 25 328 IPR027443 -
Ftr15g00588 474 MobiDBLite consensus disorder prediction 345 368 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr15g00588 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr11:4449110 Ftr15g00588 Ftr-Chr15:19087533 dispersed