Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ftr2g00501 | ATGAATATGACCACCATCATTTCCCCCAAATCATCCTCCTTTCTTCTTCACCTTCAAAACACCACCAACAAGCCACCACACTCACTCTTTCGTCTCCAAGCTCCCACCTTTCTTCCATTTTCTCTCAAATCAACCTTCAGTCCTCCAATGGCAACTCTCTCTGTAGCTTCACCCACCCTAGGACTCTCTCAGACCTTCACCAAACTCAAACAAGATGGGAAAGTAGCATTCATACCATATATCACAGCTGGTGACCCTGATCTATCAACAACAGCAGAAGCATTGAAGGTGCTCGACACTTGTGGATCAGATATAATTGAATTGGGTGTTCCATATTCGGATCCATTGGCTGATGGACCAGTCATCCAGGCTGCAGCTACGCGTGCATTATCAAGAGGGACAAATCTTGACGCAATTCTTAATATGTTGAAAGAGGTGATACCACAACTGTCATGTCCAATTGCTTTGTTCACTTATTACAACCCAATTCTTAAGCGTGGAGTGGAGAAGTTCATGGTTACTGTGAAAGAAGTTGGAGTACATGGACTTGTGGTGCCAGATGTCCCTTTGGAGGAAACTGAGCTCTTAAGACAGGAAGCTTCCAAGCATAACATCGAATTGGTACTATTAACAACACCCACTACTCCAAGAGAACGAATGAAAGCAATCGTTGAAGCTACAGAGGGTTTTCTGTACCTTGTGAGTTCTATTGGAGTGACGGGGGCTCGTGCTTCAGTAAGCGAAAAAGTTCAATCTCTCCTACAGGAAATCAAAGCGGAATCAAGTAAGCCTGTAGCTGTTGGCTTTGGCATTTCAAAACCTGAGCATGTGAAACAGGTGGCTGGATGGGGAGCTGATGGTGTGATTGTGGGCAGTGCAGTGGTCAAAATATTAGGTGAAGCAGGGTCCCCAGAAGAAGGCCTGAAAAAACTAGAAGAATTCACAAAATCTTTAAAATCTGCATTGATTTGA | 972 | 44.14 | MNMTTIISPKSSSFLLHLQNTTNKPPHSLFRLQAPTFLPFSLKSTFSPPMATLSVASPTLGLSQTFTKLKQDGKVAFIPYITAGDPDLSTTAEALKVLDTCGSDIIELGVPYSDPLADGPVIQAAATRALSRGTNLDAILNMLKEVIPQLSCPIALFTYYNPILKRGVEKFMVTVKEVGVHGLVVPDVPLEETELLRQEASKHNIELVLLTTPTTPRERMKAIVEATEGFLYLVSSIGVTGARASVSEKVQSLLQEIKAESSKPVAVGFGISKPEHVKQVAGWGADGVIVGSAVVKILGEAGSPEEGLKKLEEFTKSLKSALI | 323 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ftr2g00501 | 323 | PANTHER | TRYPTOPHAN SYNTHASE, ALPHA CHAIN | 56 | 322 | IPR002028 | GO:0000162(PANTHER)|GO:0004834(PANTHER)|GO:0004834(InterPro)|GO:0005829(PANTHER)|GO:0006568(InterPro)|GO:0009507(PANTHER) | |
| Ftr2g00501 | 323 | CDD | Tryptophan-synthase-alpha | 76 | 319 | IPR002028 | GO:0004834(InterPro)|GO:0006568(InterPro) | |
| Ftr2g00501 | 323 | Gene3D | Aldolase class I | 61 | 323 | IPR013785 | - | |
| Ftr2g00501 | 323 | NCBIfam | tryptophan synthase subunit alpha | 66 | 319 | IPR002028 | GO:0004834(InterPro)|GO:0006568(InterPro) | |
| Ftr2g00501 | 323 | FunFam | Tryptophan synthase alpha chain, chloroplastic | 60 | 323 | - | - | |
| Ftr2g00501 | 323 | Pfam | Tryptophan synthase alpha chain | 66 | 321 | IPR002028 | GO:0004834(InterPro)|GO:0006568(InterPro) | |
| Ftr2g00501 | 323 | Hamap | Tryptophan synthase alpha chain [trpA]. | 72 | 321 | IPR002028 | GO:0004834(InterPro)|GO:0006568(InterPro) | |
| Ftr2g00501 | 323 | ProSitePatterns | Tryptophan synthase alpha chain signature. | 106 | 119 | IPR018204 | GO:0004834(InterPro) | |
| Ftr2g00501 | 323 | SUPERFAMILY | Ribulose-phoshate binding barrel | 62 | 304 | IPR011060 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ftr2g00501 | K01695 | tryptophan synthase alpha chain [EC:4.2.1.20] |