AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr2g00546 ATGGACAGTTTATGGCAAGAGTACAACTCCGGCACCGGCGCCGGCACCAGCGCCGGCGTGTTTCAGTTGCCGGAGAGTCCACGTAAGCCGATGGAGTTCTTAGCGAGGTCATGGAGTGACGCTACTCTCACAACTCTGCATTCTCCACCGTCGCCGTTGATCTCTAAGGCCGGAACAACCACCGGAAATTCCAGTATCACGCTGGACACTAACGGTGTCTCCGGCGTCGACGCAGTGGAGGCGTCGGTTGCGACGACGGAGACATCGGAAACGCTGTCAGGAAACACGTTTTCGTTCGCTTCGTCCGCCACTTCGCAACTCGTGCTTGAACGAATCATGTCGTCTCAATCGGATGTATCGCCTTTAGCTTCAGGGAGACTGTCGCACAGTAGTGGACCACTGAATCCATCGCACATGGAAGAAACCGATGGTCCGCACATCTCGCCGTCTGATGAGTACGACGACGTCGTTAAGTTTTTGCGCGCAAACAACACCCTGCAACCATTGTTTGCCAATGGTCGTAGTGGATACGGGGCAGGTGGATGTAGCACCACACCTGCAGGAAAGACAGTAGGGCGGTGGTTGAAGGAGCGGAGAGAGAAGAAGAAAGAAGAGACCCGGGCCCACAATGCGCAGGTCCACGCAGCAGTGTCAGTTGCTGGAGTGGCTGCAGCAGTGGCAACCATTGCTGCAGCCACTGCAGCAGCGTCAACATCTAGCAAAGATGAACAAATGGCCAAAACTAATATGGCAGTGGCCTCAGCTGCCACTTTGGTGGCTGCACAGTGTGTGGAGGCAGCCGAAACGATGGGAGCTGAACGAGAACACCTTGTTGCTGCTGTTAGCTCTGCGGTTAATGTCAAATCCCATGGAGACATATTAACTCTCACCGCTGCAGCTGCAACAGCTCTACGGGGCGCAGCAACATTGAAGGCACGAGCATTAAAGGAAGTATGGAACATCGCGGCGGTTATCCCAGTGGAGCGAGGACTTAAAGAAAGTAAAAGCCAAGGAAAGAGCAGTGGCCATTCTGATCAGATTCCTTCTGAAGAGAACTTTTTGGGTATTTGTAACCAAGAACTTCTAGCCCGGGGGAGCGAGCTGCTCAAACGCACCCGTAATGGTGATCTTCACTGGAAGGTTGTGTCGGTTTACATCCATCGAACGGGTCAAGTTATGCTAAAGATGAAGAGTAAACATGTTGGTTCTACCATAACAAAAAAGAAGAAACATGTGGTGTTGGAGGTGTGCAAGAACATGCCGGCGTGGCCAGGGAGACATCTATTTGACGGTGGAGAGGAGCGATATTACTTCGGGCTGAGGACCATTGGACGGGGATTGGTGGAGTTCGAGTGTAGGACGCAAAGAGAGTACGACATGTGGACTCAAGGTGTTTCTAGGCTTCTTTCCATTGTAGATGAAAGGAAGTCCAACAAGTAA 1440 52.22 MDSLWQEYNSGTGAGTSAGVFQLPESPRKPMEFLARSWSDATLTTLHSPPSPLISKAGTTTGNSSITLDTNGVSGVDAVEASVATTETSETLSGNTFSFASSATSQLVLERIMSSQSDVSPLASGRLSHSSGPLNPSHMEETDGPHISPSDEYDDVVKFLRANNTLQPLFANGRSGYGAGGCSTTPAGKTVGRWLKERREKKKEETRAHNAQVHAAVSVAGVAAAVATIAAATAAASTSSKDEQMAKTNMAVASAATLVAAQCVEAAETMGAEREHLVAAVSSAVNVKSHGDILTLTAAAATALRGAATLKARALKEVWNIAAVIPVERGLKESKSQGKSSGHSDQIPSEENFLGICNQELLARGSELLKRTRNGDLHWKVVSVYIHRTGQVMLKMKSKHVGSTITKKKKHVVLEVCKNMPAWPGRHLFDGGEERYYFGLRTIGRGLVEFECRTQREYDMWTQGVSRLLSIVDERKSNK 479
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr2g00546 479 MobiDBLite consensus disorder prediction 119 146 - -
Ftr2g00546 479 PANTHER EXPRESSED PROTEIN 23 474 IPR040269 GO:0009734(PANTHER)|GO:0010087(PANTHER)|GO:0010305(PANTHER)
Ftr2g00546 479 Pfam Plant pleckstrin homology-like region 367 472 IPR013666 -
Ftr2g00546 479 MobiDBLite consensus disorder prediction 119 137 - -
Ftr2g00546 479 Pfam Auxin canalisation 24 329 IPR008546 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr2g00546 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
97855 Ftr2g00546 Ftr4g00718
401669 Ftr2g00546 Ftr6g02360
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr2:9738623 Ftr7g02126 Ftr-Chr7:95212939 dispersed
Ftr Ftr-Chr6:90635723 Ftr2g00546 Ftr-Chr2:9738623 transposed
Ftr Ftr-Chr2:9738623 Ftr4g00718 Ftr-Chr4:8177395 wgd
Ftr Ftr-Chr2:9738623 Ftr6g02359 Ftr-Chr6:90632826 wgd