AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr2g00567 ATGGATTCCATCATCTTCTCACCTTCATCTTCACCTTCATCTTCATCTTCATCTTCCACCGCCAAACGCCTGAGACCTCCGGCCGATTACGTCACCATGGACGCTATTCTCGCCTCCTTCTTATCTCTCTCCGACTCGCCGCCGGCGATCACCTCCTCCTTCGACCGCCTTGTGCAGTCCTCCGCCTCCGATTCCGATCAGAATCGTTTGATTCAACGCGCGATGCGCCTCGGAGAGCTGTTGGTTGAAGCTGGAAACAGATCTGCGAGGAGATGCTCGTGTGATCATAACGCGGTTGTCTGGCCGCTCTCGCCGGACCTTACTGTTAAGATTTTTTCGATGCTTGATACGCAGAGTGTGTGTTATGTTGCGGCTACTTGCTCGTTTTTTCAGAAATGTGCAATGGATCCTCTGTGTTTTGCTAACATTGACTTGGCTACATTAGTCCCTAAAGTCAACAACGCTGTGGTGTCAACTATGATCCATCGAGCTGGAGATGCACTTAAGTCTATAAGGCTTGGTGTATTACCAGCCATTCCTGCTCCACCTTTCTTTTCATCTCAACCATTAGTTTATAGCATAAGGAATGCAAACGATGCATCAGGAATTTCATGGAATGACAAGAGATCAAGGCAAGGAAAGGAATCTTCCATTTTAACAAGGTCCTGTCTGAATTCTTTGAGTTGCAATGGTGGTGCCCCTGGATACGGGGTTCATTTGAGAAGATTACACCTTTACAACATTGAAAGAATGGACAATGCGTCCCTCTTGACATCATTATCAGCTTGCCCATCTCTCCTTGATCTAGAAATTGTGGGCCTGCATGTCGAATTGAGGCATACATTGGAATCAATAAGTAGAAATTGTCCCTTAATAGAACGTTTGGTTTTTGAATCTTCAAAAACAGGTAGAGATGATGGTTTGAAATTCCCAACCTGCAATGAATTCGTCCTCAACTGTCCTAACATAACAACTCTAGCACTAAAAGGATTTAAGCTACATGACTACAAGGCTCGTATGCTGGTAAAGGGGTTACGAAGATTGAAGCATCTTGATCTTTCAACATCTTACTCATTCACTGGTGCATTTTTAAAGAATGTTAGTGGCAATGGTGGTGGAGATAATTTGGAGGTGATGATTTTACGAGACTGTATGCATCTAAAGGAAGTTGAAGTTGAGCGGTTTGTGACAGCTGTTCTTGCAGGGGAATTCAAGCTCCTTGGACATCTTGATATATCAAACAGAGAAGGTCTGGCATGTGAGGGTGACTGGAGCAATAGATGTTACAATGCTAGTTTTATTCCTATACAACAATTATTGGAACAGAGGCCTAATTTTTGTCTTGTAGCTGAATTCCCAAAAGGGAGTTACATTGACACTGATCAAATGATGGGCAGTGATGTAAGTTTACCATCACAGTCGAGCAGTAGCCATACATCTGATGGGTCGAGCACATCAGACGGTAGTTATAATAGTGATCATGGTAGTGGTAACGAGTACGGTAGAGAAAGTGGTTCTACGATTTACGAAGAAAGTTCAGACTGCCTCCCAGAGTTGATGATTAATAAGTGTTGA 1575 43.68 MDSIIFSPSSSPSSSSSSSTAKRLRPPADYVTMDAILASFLSLSDSPPAITSSFDRLVQSSASDSDQNRLIQRAMRLGELLVEAGNRSARRCSCDHNAVVWPLSPDLTVKIFSMLDTQSVCYVAATCSFFQKCAMDPLCFANIDLATLVPKVNNAVVSTMIHRAGDALKSIRLGVLPAIPAPPFFSSQPLVYSIRNANDASGISWNDKRSRQGKESSILTRSCLNSLSCNGGAPGYGVHLRRLHLYNIERMDNASLLTSLSACPSLLDLEIVGLHVELRHTLESISRNCPLIERLVFESSKTGRDDGLKFPTCNEFVLNCPNITTLALKGFKLHDYKARMLVKGLRRLKHLDLSTSYSFTGAFLKNVSGNGGGDNLEVMILRDCMHLKEVEVERFVTAVLAGEFKLLGHLDISNREGLACEGDWSNRCYNASFIPIQQLLEQRPNFCLVAEFPKGSYIDTDQMMGSDVSLPSQSSSSHTSDGSSTSDGSYNSDHGSGNEYGRESGSTIYEESSDCLPELMINKC 524
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr2g00567 524 MobiDBLite consensus disorder prediction 463 511 - -
Ftr2g00567 524 PANTHER F-BOX-TPR REPEAT PROTEIN POF3 101 453 - GO:0019005(PANTHER)|GO:0031146(PANTHER)
Ftr2g00567 524 SUPERFAMILY RNI-like 238 414 - -
Ftr2g00567 524 Gene3D Ribonuclease Inhibitor 100 398 IPR032675 -
Ftr2g00567 524 SUPERFAMILY F-box domain 94 145 IPR036047 GO:0005515(InterPro)
Ftr2g00567 524 MobiDBLite consensus disorder prediction 1 23 - -
Ftr2g00567 524 MobiDBLite consensus disorder prediction 1 24 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr2g00567 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
97704 Ftr1g00179 Ftr2g00567
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr1:3260958 Ftr2g00567 Ftr-Chr2:10254121 wgd