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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr2g00585 ATGTCATCAATTGGGTTGAGTTTTCTCAAAGTTCTTGAGAACCCATCAACAGGTTCCAAGAATCTTGACCAAAATCAAGAAGTTTACGTTCATCCGATGACGAAACGATCCGCATCGGCATTGAGTACCAAGAGCTTAGAAATGTGTACGGAGAGTTTAGGAAGTGAAACTGGGAGTGATGTGAGTGAAAGTGGTGATGAATTCTCATTCTCTTCAATTTCAATGGCTGAAAGAGAGAGATTGAGGTCAATTCAAAAGTCAAACCACCGGAGTTTTGACCGGAAAATTCGCCGGAATGACTTTCCTCCGCCGTTGACCTCCATCAGCGGGTCCCACGGGGCGGTGAAGGTGAGGCACCACCGTGAAGGTGGACGGTTGGTTATCAAAGCTGTGAGCTTTTCTAACCGCGGTACAAATTTTCAAGCTGAACGTACAAATGGGAGACTCAAGCTTTCATTGTTGAGGGACTGTTGTATAAATTATGAAAGTGGAAGGGTTGAAATGGAAGAATATGAAAGTGAAAGGGTTGAAATGGAAGAATTTGAAAGTGAAAGGGCTGAAATGGAAGAATATGAAGAAGGTGGTGAAGTGGAATATGACGATGATGATAACGAGGAGGTGGGTGTGGTGGTGGCGGAGGAGGAGGCAGAGAACGGTGGTTCCGGTGGTGGTTGGCGGTGGGATGTGGATGGAAACCGCTGGCGGCTCGCCGGAAAAGGGGAGTTGAAGATGCTAACTAGGTGTAAGGAGGGTGGAGATGGGAACAAAGTGTTTGCAAATTGGGGTTCATCTTGGGTGGCAATATCTTAA 810 46.3 MSSIGLSFLKVLENPSTGSKNLDQNQEVYVHPMTKRSASALSTKSLEMCTESLGSETGSDVSESGDEFSFSSISMAERERLRSIQKSNHRSFDRKIRRNDFPPPLTSISGSHGAVKVRHHREGGRLVIKAVSFSNRGTNFQAERTNGRLKLSLLRDCCINYESGRVEMEEYESERVEMEEFESERAEMEEYEEGGEVEYDDDDNEEVGVVVAEEEAENGGSGGGWRWDVDGNRWRLAGKGELKMLTRCKEGGDGNKVFANWGSSWVAIS 269
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr2g00585 269 Coils Coil 171 191 - -
Ftr2g00585 269 PANTHER FANTASTIC FOUR-LIKE PROTEIN (DUF3049) 5 262 IPR021410 -
Ftr2g00585 269 Pfam Fantastic Four meristem regulator 100 153 IPR046431 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr2g00585 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
97868 Ftr2g00585 Ftr4g00696
401672 Ftr2g00585 Ftr6g02351
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr10:64144083 Ftr2g00585 Ftr-Chr2:10424333 dispersed
Ftr Ftr-Chr2:10424333 Ftr4g00696 Ftr-Chr4:7979969 wgd
Ftr Ftr-Chr2:10424333 Ftr6g02351 Ftr-Chr6:90492645 wgd