AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr2g00617 ATGGGATTCAATTCAGTGTATAGGGTGTTACAGGAGGTTTTTCCACAGGTTGATTCCCGCGCTTTAAAAGCTGTGGCTATAGAACACTCTAAGGATGCTGATACGGCTGTTGAAGTTGTTCTTGTTGAGATCATTCCTAATCTTCCTGTAAAGCCACTTACAGTTGGTTCTTCAAGTAATAGCAAGAGTTCACTTGGTTTCATTGAAGCTTCAGGTGGCGGTGAAACTGGTCAACTAGAGTCAACTATGGATCATTTAGTTATTAACCCTTGTAATCATGAGCAGTCAACTGAGGCTTGTGTTGTTTCAAGCATTGATGGAAGCTTAACAGGTGTAGCGGAAGCTTCAGATGAAGTTTTTTCTGCTCAAGTTAACAGTCACACAGTTATAGAGCCTGTAAATTTGGAATCACTTAACACCTCATCTTATCATGATGCAAATGGTGACACCATGACTGAATGTTCATCAAAGTTTTTGGAGACCTTTGGAGACAACAATAGTAACAATCATGATAGTGGTTCTTCTGACAACCATGGTCAAGGATGTGCAAAAAACGGATGTGAAAATTCTGATCTTGAAACAATGTTTGTTCCAGTAAGAAATCAGATAGTTGGAGTTTGTGAAACAAACTTAGTTGCAACTCAAGAATTAGGTCCAAGTTCACCAAAATCTGCATCTGAAAAAGATGCTTTTGCAGTTGAGTTTGTTAATTCAGAGGATGAGTCAGGTATGGGTTCTGTGCTTACTAGATCAGAGGAAATATGTAGCACTGAATTTCTTGAGGAAATTATTGAAGATGCTAAAAATAACAAGAAAACTCTTGTATTGGCCATGAATTCAGTTGTTGATCTTATGCGAGAAGTAGAATCCAAAGAAAAAGCTGCCGACCAAGCAAAAGAAGCAGCTACCCAGGGTTGCTCAGATATTCTTGCCAAGGTGGATGAGGTTAAACAGGCTCTTTTACGGGCAAAAGAAGCAAACGAGATGCATGCTGGAGAAGTTAACGCAGAAAAGGCAATTTTAGCTACCGAATTAAAAGAGCTCCAGCTTCGTCTGGTCACTTTGTCGGATGAGCGAAACAGATCCCTTGGAATTCTTGATGAGATGCGTAAAGCTCTAGAAATTAGATTGGCTACTGCTTTAGATGAAATTGCAGCAACAGAGAAACAAAAGTTGGAAAATGAACAGGCTGCGAGAGAAGCACTTTCGTATCAAGAAAGCCAAATGGAAAAAGTTGTTGAAGAGTCTAAGAAACTGAAGCTGGAAGCAGAGGAGAATTCAAAGTTGCAAGAATTTCTCATGGATCGTGGCCGTGCAATTGATATCTTACAAGGAGAGATTTATGTCAAATGCCAGGATGTGTTACTCCTAAAAGATAAGTTTGACAAGCGAATCCCGCTGTCGCGGTCACTTTCTTCTAGTCAAACGTCGTCAGTCTTAGCCTCTTCAGGTTTATCTATTAGAAGTGTCGTTACACCCCTTGAGCCCGAGCTTGAGCCCGAAACGGAGGCATATGAAAGCCTGAAGAAGAGTGCAGAACTGGATGATTCGTATGGATTTGTCGACAAAACTTCAAGGTCAAATGAAAAAACTGTAAATCCTGTTGATGATCACAAGGTGTTTCTAGATGACGGATGGGATTTTCTTGACAAGTGA 1656 40.34 MGFNSVYRVLQEVFPQVDSRALKAVAIEHSKDADTAVEVVLVEIIPNLPVKPLTVGSSSNSKSSLGFIEASGGGETGQLESTMDHLVINPCNHEQSTEACVVSSIDGSLTGVAEASDEVFSAQVNSHTVIEPVNLESLNTSSYHDANGDTMTECSSKFLETFGDNNSNNHDSGSSDNHGQGCAKNGCENSDLETMFVPVRNQIVGVCETNLVATQELGPSSPKSASEKDAFAVEFVNSEDESGMGSVLTRSEEICSTEFLEEIIEDAKNNKKTLVLAMNSVVDLMREVESKEKAADQAKEAATQGCSDILAKVDEVKQALLRAKEANEMHAGEVNAEKAILATELKELQLRLVTLSDERNRSLGILDEMRKALEIRLATALDEIAATEKQKLENEQAAREALSYQESQMEKVVEESKKLKLEAEENSKLQEFLMDRGRAIDILQGEIYVKCQDVLLLKDKFDKRIPLSRSLSSSQTSSVLASSGLSIRSVVTPLEPELEPETEAYESLKKSAELDDSYGFVDKTSRSNEKTVNPVDDHKVFLDDGWDFLDK 551
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr2g00617 551 PANTHER OS10G0315400 PROTEIN 1 551 - -
Ftr2g00617 551 Coils Coil 281 301 - -
Ftr2g00617 551 Coils Coil 331 358 - -
Ftr2g00617 551 CDD CUE 8 41 - -
Ftr2g00617 551 Coils Coil 370 390 - -
Ftr2g00617 551 ProSiteProfiles CUE domain profile. 2 45 IPR003892 GO:0043130(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr2g00617 - -
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
97870 Ftr2g00617 Ftr4g00686
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr2:11112450 Ftr4g00686 Ftr-Chr4:7818705 dispersed