AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr2g00627 ATGGCGAAAAAGCTCGTGAAATACGCCGTTGTGGACGCATTTACAGACACTCCGTTTAAAGGAAATCCGGCAGCCGTGTGTTGGTTAGACGACATCGAGAAAGATGAAAAGTGGTTGCAATCAGTTGCAACTGAATTCAACATCTCAGAGACTTGTTATCTGACTCCGATTGCCGAAAACGGTTCGGAAAACCCTAGATTCAGTCTCAGATGGTTCACTCCTGTAGCTGAGGTGGAGCTTTGTGGTCATGCAACTTTAGCAGCTTCCCACTTCCTTTTTCAGTCTGGATTGGTGAATTCTGACATGATTGAATACTCAACCCTTTCTGGAATTTTGACTGCCAAAAGAATTCCTGCTAGCAAGATCAATGGCTCATCGAATGGTGAATCACAAGACGGCTTCTACATAGAATTGGATTTCCCTGTTGTGCCTGTTTTTGATTACAATGATCTTGAGGTTTCTGCAATTTCGGAGATATTAAATGGTGTTTCTATTGTTGATGTAAAGAAGAACACTCTTAATGATATATATGTGGTGCTTCCATCAGCACAAGACGTTGCAGAATTCAAGCCTCAAATCAATAAGATTAAAGAAGCCCCGGACAGAGGGATAGTGATCACGGCACGTGCACCAAACAGTTCAGGGTTCGACTTTTATAGTCGCTTCTTCTGCCCAAAACTGGAATTGATGAGGTAA 696 42.53 MAKKLVKYAVVDAFTDTPFKGNPAAVCWLDDIEKDEKWLQSVATEFNISETCYLTPIAENGSENPRFSLRWFTPVAEVELCGHATLAASHFLFQSGLVNSDMIEYSTLSGILTAKRIPASKINGSSNGESQDGFYIELDFPVVPVFDYNDLEVSAISEILNGVSIVDVKKNTLNDIYVVLPSAQDVAEFKPQINKIKEAPDRGIVITARAPNSSGFDFYSRFFCPKLELMR 231
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr2g00627 231 PANTHER PHENAZINE BIOSYNTHESIS PROTEIN 6 228 IPR003719 GO:0003824(InterPro)|GO:0005737(PANTHER)|GO:0009058(InterPro)|GO:0016853(PANTHER)
Ftr2g00627 231 Pfam Phenazine biosynthesis-like protein 11 227 IPR003719 GO:0003824(InterPro)|GO:0009058(InterPro)
Ftr2g00627 231 NCBIfam PhzF family phenazine biosynthesis isomerase 8 99 IPR003719 GO:0003824(InterPro)|GO:0009058(InterPro)
Ftr2g00627 231 SUPERFAMILY Diaminopimelate epimerase-like 7 228 - -
Ftr2g00627 231 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 5 151 - -
Ftr2g00627 231 PIRSF Ismrse-PhzF 4 230 IPR003719 GO:0003824(InterPro)|GO:0009058(InterPro)
Ftr2g00627 231 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 152 230 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr2g00627 - -