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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr2g00698 ATGATTGGAGGAGAGGTGGAGATGGAGTCGGAGAGCACACGGCGTATATTAGCGACGACGAGGTATATCAGCTATGGAGCGCTGCAGGGGAACAATGTGCCGTGCTCGCAGAGAGGTGCGTCGTATTATAACTGTCAATCTGGTGGTCAGGCGAATCCGTATCAACGTGGTTGCAGTACGATTACTCGTTGCCGACGGTGA 201 53.23 MIGGEVEMESESTRRILATTRYISYGALQGNNVPCSQRGASYYNCQSGGQANPYQRGCSTITRCRR 66
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr2g00698 66 Pfam Rapid ALkalinization Factor (RALF) 5 66 IPR008801 -
Ftr2g00698 66 PANTHER RAPID ALKALINIZATION FACTOR-LIKE 5 66 - GO:0009506(PANTHER)|GO:0019722(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr2g00698 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
97875 Ftr2g00698 Ftr4g00653
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr2:13149222 Ftr4g00653 Ftr-Chr4:7467990 dispersed
Ftr Ftr-Chr2:13149222 Ftr14g00547 Ftr-Chr14:7558718 transposed