AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

leaf

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr2g00823 ATGGGGACCACCGGAACATCATGGAAACTCTCGGATCACCCGAAGCTACCCAAAGGCAAGACCATCGCCGTCGTCGTGTTGGACGGTTGGGGTGAAGCTGCACCCGACCAATACAATTGCATTCATGTCGCTGAAACACCGACCATGGATTCCCTCAAAAACAGTGCTCCTGATCGGTGGAGATTGGTGAGGGCCCACGGTACTGCCGTGGGGCTTCCCACAGATGATGATATGGGGAACAGTGAAGTCGGACATAATGCTCTTGGTGCCGGAAGAATCTATGCTCAAGGTGCAAAACTTGTGGATCTTGCTCTTGCCTCTGGGAAAATATACGAAGATGAGGGTTTTAATTACATTAAGGAGTCTTTTGCAAACAACACACTTCATCTCATTGGATTGTTGAGTGATGGAGGTGTGCATTCTCGTATGGATCAGTTACAGTTGTTGCTCAAAGGTGCTAGTGAGCGTGGTGCCAAGAGGATATGTGTTCATGTGCTTACTGATGGACGTGATGTGGTAGATGGTTCAAGTGTCGGTTTTGCTGAAACGCTTGAAAAGGATCTAGCAGAGTTGCGTGGTAAAGGCATTGATGCACAGGTTGCCTCTGGTGGTGGCCGCATGTATGTCACCATGGATCGTTATGAGAATGACTGGGAGGTTGTGAAACGAGGTTGGGATGCTCAGGTTCTTGGTGAAGCGCCGCACAAGTTTAAGAATGTTGTTGAGGCGATCAAGAAGCTGAGGGAAGCACCCAATGCTAATGACCAATACTTACCACCATTTGTGATTGTTGATGACAATGGGAAGCCTGTGGGTCCCATAATGGACGGTGATGCTGTTGTCACATTCAACTTTAGAGCAGATCGTATGACAATGCTTGCACAAGCCCTCGAGTATGAAAAGTTTGATAAATTTGACAGAGTGAGGTTCCCCAAAATCCGCTATGCTGGAATGCTTCAATATGATGGGGAGTTGAAGCTTCCAAAACATTACCTTGTTTCTCCTCCGTTGATAGAGAGGACTTCTGGTGAATATCTAGTCAATAATGGTATCCGAACCTTTGCTTGCAGTGAAACAGTCAAATTTGGTCATGTTACATTCTTTTGGAACGGAAATCGTTCTGGATATTTTAATTCTGAGTTAGAGGAATATGTGGAAATTCCGAGTGATATTGGAATTACCTTCAATGTCCAACCAAAGATGAAGGCTCTGGAGATTGGTGAGAAGGCCCGTGATGCGATTCTCAGTCGCAAATTTGACCAGGTAAGGGTGAATATACCAAATGGTGACATGGTTGGGCATACTGGTGACATTGAGGCTACAATTGTGGCCTGCAAAGCTGCTGATCAAGCTGTTAAGATGATTCTTGATGCAATAGAGCAAGTGGGTGGAATATATGTGGTGACTGCAGATCATGGTAATGCAGAAGACATGGTGAAGAGAAATAAGAAGGGAGAGCCTCTTGTTGACAAGGATGGCAAAGTTCAGATCCAAACCTCACACACTCTTCAACCGGTGCCTGTTGCCATTGGTGGTCCTGGATTAGCACCAGGTGTGAAATTCCGCAAGGATGTACCCAATGGCGGGCTAGCAAATGTAGCTGCCACGGTGATGAATCTGCATGGTTTTGTGGCTCCTGATGACTATGAGACCACCCTTATTGAAGTTGTGGATTAA 1677 46.15 MGTTGTSWKLSDHPKLPKGKTIAVVVLDGWGEAAPDQYNCIHVAETPTMDSLKNSAPDRWRLVRAHGTAVGLPTDDDMGNSEVGHNALGAGRIYAQGAKLVDLALASGKIYEDEGFNYIKESFANNTLHLIGLLSDGGVHSRMDQLQLLLKGASERGAKRICVHVLTDGRDVVDGSSVGFAETLEKDLAELRGKGIDAQVASGGGRMYVTMDRYENDWEVVKRGWDAQVLGEAPHKFKNVVEAIKKLREAPNANDQYLPPFVIVDDNGKPVGPIMDGDAVVTFNFRADRMTMLAQALEYEKFDKFDRVRFPKIRYAGMLQYDGELKLPKHYLVSPPLIERTSGEYLVNNGIRTFACSETVKFGHVTFFWNGNRSGYFNSELEEYVEIPSDIGITFNVQPKMKALEIGEKARDAILSRKFDQVRVNIPNGDMVGHTGDIEATIVACKAADQAVKMILDAIEQVGGIYVVTADHGNAEDMVKRNKKGEPLVDKDGKVQIQTSHTLQPVPVAIGGPGLAPGVKFRKDVPNGGLANVAATVMNLHGFVAPDDYETTLIEVVD 558
leaf

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr2g00823 558 FunFam 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 96 339 - -
Ftr2g00823 558 CDD iPGM 20 554 IPR005995 GO:0004619(InterPro)|GO:0006007(InterPro)
Ftr2g00823 558 Gene3D Alkaline Phosphatase, subunit A 23 546 IPR017850 -
Ftr2g00823 558 Pfam BPG-independent PGAM N-terminus (iPGM-N) 102 322 IPR011258 GO:0004619(InterPro)|GO:0005737(InterPro)|GO:0006007(InterPro)|GO:0030145(InterPro)
Ftr2g00823 558 SUPERFAMILY Alkaline phosphatase-like 21 548 IPR017850 -
Ftr2g00823 558 NCBIfam 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 21 549 IPR005995 GO:0004619(InterPro)|GO:0006007(InterPro)
Ftr2g00823 558 SUPERFAMILY 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain 96 331 IPR036646 GO:0004619(InterPro)|GO:0005737(InterPro)
Ftr2g00823 558 Pfam Metalloenzyme superfamily 20 543 IPR006124 GO:0003824(InterPro)|GO:0046872(InterPro)
Ftr2g00823 558 Gene3D - 96 340 IPR036646 GO:0004619(InterPro)|GO:0005737(InterPro)
Ftr2g00823 558 PANTHER 2,3-BISPHOSPHOGLYCERATE-INDEPENDENT PHOSPHOGLYCERATE MUTASE 8 555 IPR005995 GO:0004619(InterPro)|GO:0006007(InterPro)|GO:0030145(PANTHER)|GO:0044262(PANTHER)|GO:0046537(PANTHER)
Ftr2g00823 558 PIRSF IPGAM 15 557 IPR005995 GO:0004619(InterPro)|GO:0006007(InterPro)
leaf

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr2g00823 K15633 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.12]
leaf

Event-related genes

Select Gene_1 Gene_2 Event_name
97880 Ftr2g00823 Ftr5g02690
leaf

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2818067 Ftr Ftr2g00823 Ftr-Chr2:15555190 Ftr5g02690 Ftr-Chr5:100637283