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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr2g00825 ATGGACATCGAGAAGAAAGACGAACAACCTCTCAGATCCACCACCACCACCGCCTCCGCCGTCTCCGGCCACTCCTCCGGCAACCGCCACCGCCGGCGACGCATCATCATCTGCTCATCGATCATCGGAGTCACACTCACCATCGCCTTAATCATACTCATTCTAGCCCTCACCGTCTTCAAGCCCAAAAAGCCCGTTCTAACAGTCGATTCCGTATCGATTCAAGACCTTGATGTTTCCGTCAATCCGATTCCGATTCAGGTGTCGTTGAACCTCTCGCTTGCTCTCGGAATCACGATCGAGAATCGGAATAAGGTGAGTATCAGTTACAAGAGTAGCTCGTCGGCGTTACGTTACAGAGGTAAGGAGATCGGTAGCGTTCCGATTCCGGCCGGAAAACTTGGGGCTGATGATCGGACGGGGTTGAATCTGACGCTTACGGTGTTTGCTGATCGATTGGTGTCTGATTCGGAGATCTATGGGGATGTTCTTAGAGGTAATTTGCCCATTTCTACTTATACGAGAATCAAAGCGAAAGTTCGTGTGCTGTTCTTTCATATTCATGTTACGTCTACTTCCACCTGTGATGTGAATATTGATGTGCAGTCTAGACGTGTTGCGAATCAAACGTGCCAGTATAAGAACAAACTTTAG 654 49.08 MDIEKKDEQPLRSTTTTASAVSGHSSGNRHRRRRIIICSSIIGVTLTIALIILILALTVFKPKKPVLTVDSVSIQDLDVSVNPIPIQVSLNLSLALGITIENRNKVSISYKSSSSALRYRGKEIGSVPIPAGKLGADDRTGLNLTLTVFADRLVSDSEIYGDVLRGNLPISTYTRIKAKVRVLFFHIHVTSTSTCDVNIDVQSRRVANQTCQYKNKL 217
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr2g00825 217 MobiDBLite consensus disorder prediction 1 26 - -
Ftr2g00825 217 Gene3D - 53 200 - -
Ftr2g00825 217 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 25 211 - -
Ftr2g00825 217 Pfam Late embryogenesis abundant protein 98 193 IPR004864 -
Ftr2g00825 217 SUPERFAMILY LEA14-like 50 156 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr2g00825 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
97881 Ftr2g00825 Ftr5g02692
401687 Ftr2g00825 Ftr6g02282
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3033471 Ftr Ftr2g00825 Ftr-Chr2:15565205 Ftr5g02692 Ftr-Chr5:100644140
3036875 Ftr Ftr2g00825 Ftr-Chr2:15565205 Ftr6g02282 Ftr-Chr6:89590706