AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr2g00836 ATGTCTACTGTTGATCGTCTTCTTCAATCTAATCTCGCCGGAAACGATCGGCATTTGCATCATGTGAGGCATGTTCACCACCTCCGATTACCGAATCTCACCTCCAAAACACTCGTCGATTTCACCGGTTTTTCTCTCCGATCAAAGCCGATCAAGCTAGATTTATCATCTAATCGATCGATTACACCTTGTGCTGGTGGCGATGGTGGTGGTTCCGGTGTCCGTCACGGCGGTGACGGTGGTGGTAGTGACCGTAGCGGCGGCGGCGGCGGCGGCGGCGGAGAGTTCGATGACTCAGGTTCGTTAGATAGTTTTGGGCCAATTGGGGCTTTTCTTAGTGGTTGGAGATCTAGGGTTGCAGCTGATCCCCAATTTCCATTCAAGGTGTTAATGGAAGAAGTTGTTGGTGTGAGTGCAAATGTGGTTGGTGACATGGCGACTCGCCCGAATTTCGGGTTAAACGAACTCGATTTCGTGTTCTCGACACTAGTTGTCGGGTCAATCATGAATTTCATCCTAATGTATCTGTTAGCACCCACCATGACATCCGGATCAGCAGCCCTCCCTTCGATTTTCGCCAGTTCGCCAGCGAGCCACATGTTCGAGCCTGGGGCGTACACCCTGGTCAACAGGCTAGGGACGTTTGTGTACAAAGGAACACAGTTTGCTGCCGTGGGTTTCGCAGCTGGTTTGGTTGGAACCGCATTGTCAAACGGGCTGATCAAGATGAGGAAAAAGATGGACCCTAACTTCAAGTCACCAAACAAGGCTCCACCCACTGTTTTGAACGCGATCACATGGGCGATTCATATGGGTATAAGCAGTAATCTGAGGTACCAAAGTTTGAATGGGATTGAGTTCATGCTGGCAAAGAGGTTGCCACCATTGTTGTTCAAGAGCTCAGTGTTCGGGTTGAGGTTGGTGAACAATGTTCTTGGTGGAATGACTTTTGTGATGCTCGCGAGGATGACTGGATCGCAAAGCACGAGTGGAGATGAAGACAAGATTGCTGATGAAGAGAGTGCTGATGAGGAGAAGAAGCTACTGAGCAATGAAATTGCTTCAAAGTAA 1071 49.39 MSTVDRLLQSNLAGNDRHLHHVRHVHHLRLPNLTSKTLVDFTGFSLRSKPIKLDLSSNRSITPCAGGDGGGSGVRHGGDGGGSDRSGGGGGGGGEFDDSGSLDSFGPIGAFLSGWRSRVAADPQFPFKVLMEEVVGVSANVVGDMATRPNFGLNELDFVFSTLVVGSIMNFILMYLLAPTMTSGSAALPSIFASSPASHMFEPGAYTLVNRLGTFVYKGTQFAAVGFAAGLVGTALSNGLIKMRKKMDPNFKSPNKAPPTVLNAITWAIHMGISSNLRYQSLNGIEFMLAKRLPPLLFKSSVFGLRLVNNVLGGMTFVMLARMTGSQSTSGDEDKIADEESADEEKKLLSNEIASK 356
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr2g00836 356 PANTHER PROTEIN RETICULATA-RELATED 2, CHLOROPLASTIC-RELATED 23 329 - -
Ftr2g00836 356 MobiDBLite consensus disorder prediction 326 356 - -
Ftr2g00836 356 MobiDBLite consensus disorder prediction 57 96 - -
Ftr2g00836 356 Pfam Protein RETICULATA-related 118 285 IPR021825 -
Ftr2g00836 356 MobiDBLite consensus disorder prediction 332 356 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr2g00836 - -
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Event-related genes

Select Gene_1 Gene_2 Event_name
401688 Ftr2g00836 Ftr6g02278
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2818078 Ftr Ftr2g00836 Ftr-Chr2:15785332 Ftr6g02278 Ftr-Chr6:89568233
2838605 Ftr Ftr10g00642 Ftr-Chr10:7374961 Ftr2g00836 Ftr-Chr2:15785332
2840710 Ftr Ftr15g01285 Ftr-Chr15:58115404 Ftr2g00836 Ftr-Chr2:15785332
3036876 Ftr Ftr2g00836 Ftr-Chr2:15785332 Ftr6g02277 Ftr-Chr6:89568233