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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr2g00838 ATGCAGACTTCATCTTCTCCAGCACTATGTGCTGTCGTTCCTGTTGATTGCATCTTCAATTCTTCGAATCACCTACCGTATCCTTCAAGTTTCAATTTGGGGTTATCCACAGGGAGTAGAAAGCTCAAGCTTTCTAGGTTGCAGGCTGGATTTTGGGAGTCTATTAGATCTGGGTTAATAAAGAACAACTCTACACAGGTTATAGAGCCATCTTCTAGTTCCCAAGAAGATGAAGAGCCTCTTCCAGAGGAATTTGTACTTGTCGAAAAAACGCTACCAGATGGAACAATTGAACAAATTATTTTTTCTTCAGGTGCAGAAGTTGATGTATATGATCTCCAAGCTTTATGTGATAAGTGCATTTTGGGAAGTTACTTCACAGAATTAACAGAACCGAATAATGAAAAGAAGCTCATTGGCATGGCTCGCGCCACCTCAGATCATGCATTCAATGCAACAATATGGGATGTCCTTGTAGATCCTAGCTACCAGGGGCAAGGACTTGGAAAAGCTCTAATTGAGAAGCTTATAAGAGCTCTACTGCAGAGGGACATTGGCAACATATCACTGTTCGCAGACAGTAAAGTTGTGGAATTTTATAGAAATCTAGGATTTGAACCCGACCCAGAGGGCATCAAAGGTATGTTCTGGTATCCTAGGTTTTAG 666 41.29 MQTSSSPALCAVVPVDCIFNSSNHLPYPSSFNLGLSTGSRKLKLSRLQAGFWESIRSGLIKNNSTQVIEPSSSSQEDEEPLPEEFVLVEKTLPDGTIEQIIFSSGAEVDVYDLQALCDKCILGSYFTELTEPNNEKKLIGMARATSDHAFNATIWDVLVDPSYQGQGLGKALIEKLIRALLQRDIGNISLFADSKVVEFYRNLGFEPDPEGIKGMFWYPRF 221
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr2g00838 221 CDD NAT-SF 134 190 - -
Ftr2g00838 221 Gene3D - 107 218 - -
Ftr2g00838 221 PANTHER ACYL-COA N-ACYLTRANSFERASE 10 219 IPR045039 GO:0005737(PANTHER)|GO:0008080(InterPro)|GO:0008080(PANTHER)
Ftr2g00838 221 Pfam Acetyltransferase (GNAT) family 135 205 IPR000182 GO:0016747(InterPro)
Ftr2g00838 221 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 100 221 IPR000182 GO:0016747(InterPro)
Ftr2g00838 221 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 134 211 IPR016181 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr2g00838 K22450 aralkylamine N-acetyltransferase [EC:2.3.1.87]
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2803219 Ftr Ftr12g03241 Ftr-Chr12:97491391 Ftr2g00838 Ftr-Chr2:15855327
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Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
Ftr Acetyltransf_1 5.5e-14 CL0257 TR GNAT