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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr2g00853 ATGGGACTTTGCTGCTTCTCCTCGACGCCGACTGATGAAGAAGAGATTGATATTCATCCTGAGTTTGCAGGGGGTAATGTGACTCTCATCACTACCAAGAGTGCTTGGGACCAAAAGCTGTCAGAAGCAAAGATTCAAGGCAAAGTAGTTATTGCCAACTTCAGTGCAACTTGGTGTGGTCCATGCAAATCAATTGCACCACACTACGTTGAGCTATCGGAGAAGTATCCGTCTCTTATGTTCCTGACCATTGATGTTGATGAATTAACGGAGTTTAGCACAGAAATGGATGTAAAAGCTACTCCAACATTCTTCTTCTTTAGAGATGGTAAACAGATTGATAAACTTGTGGGAGCCAACAAGCCTGAACTGCAGAAAAAGATAACCGCAATTGTTGATTCACAGGTCCCAACTGGTCAGAAGTAA 426 42.96 MGLCCFSSTPTDEEEIDIHPEFAGGNVTLITTKSAWDQKLSEAKIQGKVVIANFSATWCGPCKSIAPHYVELSEKYPSLMFLTIDVDELTEFSTEMDVKATPTFFFFRDGKQIDKLVGANKPELQKKITAIVDSQVPTGQK 141
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr2g00853 141 PANTHER THIOREDOXIN 25 130 IPR050620 -
Ftr2g00853 141 Gene3D Glutaredoxin 1 139 - -
Ftr2g00853 141 ProSiteProfiles Thioredoxin domain profile. 13 133 IPR013766 -
Ftr2g00853 141 Pfam Thioredoxin 28 129 IPR013766 -
Ftr2g00853 141 PRINTS Thioredoxin family signature 97 108 - -
Ftr2g00853 141 PRINTS Thioredoxin family signature 58 67 - -
Ftr2g00853 141 PRINTS Thioredoxin family signature 50 58 - -
Ftr2g00853 141 SUPERFAMILY Thioredoxin-like 23 132 IPR036249 -
Ftr2g00853 141 CDD TRX-family 40 128 - -
Ftr2g00853 141 FunFam Thioredoxin 24 133 - -
Ftr2g00853 141 ProSitePatterns Thioredoxin family active site. 51 69 IPR017937 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr2g00853 K03671 thioredoxin
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Event-related genes

Select Gene_1 Gene_2 Event_name
401689 Ftr2g00853 Ftr6g02276
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
3036877 Ftr Ftr2g00853 Ftr-Chr2:16229595 Ftr6g02276 Ftr-Chr6:89562626