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AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr2g00862 ATGCAGTTGGATAATAGTATAGCGCGCGATAATTCTAGGCTTGTATACATCAATAACCCTCAAAGAACCAATGAAGAATATGAATTCACAGGGAACAAGATCACTACTAGCAAGTATACCGTCATTAATTTCTTACCCAAGAATCTCTTCATCCAGTTTCATCGGGTAGCGTACATATATTTTTTAGTTATTGCTGCCCTCAATCAGCTTCCTCCTCTTGCAGTCTTTGGGAGAACCGTGTCTCTTTTCCCTCTACTTTTTGTTCTCACAGTAACTGCTATAAAAGATGGTTATGAGGATTGGCGAAGACATAGATCTGACAGGAATGAGAATAATAAAGAGTCATTGGTGCTTCAAATTGGTAAGTTTAAGCCAAAAAGATGGAAGGATATCCAGGTAGGCGAGGTGGTCAAGATTTGTGCTGATGAGGCGATCCCGTGTGACATAGTGCTGCTAGGGACTAGTGATCCTAGTGGTGTTGCTTACATTCAACCATGA 498 40.76 MQLDNSIARDNSRLVYINNPQRTNEEYEFTGNKITTSKYTVINFLPKNLFIQFHRVAYIYFLVIAALNQLPPLAVFGRTVSLFPLLFVLTVTAIKDGYEDWRRHRSDRNENNKESLVLQIGKFKPKRWKDIQVGEVVKICADEAIPCDIVLLGTSDPSGVAYIQP 165
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr2g00862 165 PANTHER PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE 8 164 - GO:0005886(PANTHER)|GO:0045332(PANTHER)|GO:0140326(PANTHER)
Ftr2g00862 165 SUPERFAMILY Calcium ATPase, transduction domain A 114 156 IPR008250 -
Ftr2g00862 165 Pfam Phospholipid-translocating ATPase N-terminal 15 80 IPR032631 -
Ftr2g00862 165 SUPERFAMILY Calcium ATPase, transmembrane domain M 29 116 IPR023298 -
Ftr2g00862 165 Gene3D - 89 163 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr2g00862 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2818099 Ftr Ftr2g00862 Ftr-Chr2:16507118 Ftr7g02439 Ftr-Chr7:99556474
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Gene Family Members

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Ftr1g01860 . 5 113 Primary Pumps ATPases gene family AT2G07560 79.817 2.28e-58 191.0
Ftr1g01861 . 135 478 Primary Pumps ATPases gene family AT1G80660 84.884 0.0 621.0
Ftr1g01862 . 514 954 Primary Pumps ATPases gene family AT1G80660 82.54 0.0 774.0
Ftr1g01868 . 2 769 Primary Pumps ATPases gene family AT1G15690 88.281 0.0 1378.0
Ftr1g02267 . 266 352 Primary Pumps ATPases gene family AT5G62670 91.954 7.35e-50 166.0
Ftr1g02510 WGDA 58 442 Primary Pumps ATPases gene family AT1G20260 28.928 1.17e-29 120.0
Ftr2g00163 . 287 1061 Primary Pumps ATPases gene family AT1G07670 79.151 0.0 1272.0
Ftr2g00164 . 1 257 Primary Pumps ATPases gene family AT1G07810 76.265 1.85e-133 401.0
Ftr2g00528 ACH 23 479 Primary Pumps ATPases gene family AT3G63380 64.516 4.99e-178 525.0
Ftr2g00529 ACH 711 1012 Primary Pumps ATPases gene family AT3G22910 82.781 2.42e-177 515.0
Ftr2g00862 . 62 219 Primary Pumps ATPases gene family AT5G04930 64.557 9.91e-70 226.0
Ftr2g01194 . 251 343 Primary Pumps ATPases gene family AT5G62670 79.57 1.14e-43 151.0
Ftr2g02987 . 42 979 Primary Pumps ATPases gene family AT1G63440 57.508 0.0 1089.0
Ftr2g02995 . 1 261 Primary Pumps ATPases gene family AT3G58730 79.693 1.07e-155 432.0
Ftr3g00083 . 2 233 Primary Pumps ATPases gene family AT4G09650 57.872 9.67e-92 268.0
Ftr3g00226 ACH 1 70 Primary Pumps ATPases gene family AT5G55290 82.857 1.88e-39 122.0
Ftr3g00471 . 6 410 Primary Pumps ATPases gene family AT3G47950 91.358 0.0 718.0
Ftr3g00472 . 427 641 Primary Pumps ATPases gene family AT3G47950 93.488 4.03e-141 416.0
Ftr3g00473 . 650 960 Primary Pumps ATPases gene family AT3G47950 81.731 6.00e-180 519.0
Ftr3g00636 ACH 1 165 Primary Pumps ATPases gene family AT1G19910 98.788 1.20e-112 315.0
Ftr3g01310 . 1 487 Primary Pumps ATPases gene family AT4G38510 96.728 0.0 965.0
Ftr3g02029 . 427 633 Primary Pumps ATPases gene family AT3G47950 86.473 3.59e-123 369.0
Ftr3g02683 WGDA 1 126 Primary Pumps ATPases gene family AT4G32530 85.714 7.93e-70 206.0
Ftr3g02715 WGDA 1 817 Primary Pumps ATPases gene family AT2G28520 79.559 0.0 1326.0
Ftr3g03051 . 47 951 Primary Pumps ATPases gene family AT1G63440 53.252 0.0 966.0
Ftr4g00016 . 3 351 Primary Pumps ATPases gene family AT1G78920 79.202 0.0 562.0
Ftr4g00949 ACH,WGDA 55 1021 Primary Pumps ATPases gene family AT3G57330 68.705 0.0 1367.0
Ftr5g00651 ACH 1 151 Primary Pumps ATPases gene family AT1G19910 99.338 2.73e-102 290.0
Ftr5g01671 . 19 233 Primary Pumps ATPases gene family AT4G09650 55.046 2.00e-81 242.0
Ftr5g01981 . 313 1021 Primary Pumps ATPases gene family AT3G57330 69.188 0.0 995.0
Ftr5g01982 . 2 124 Primary Pumps ATPases gene family AT2G41560 42.276 8.05e-28 104.0
Ftr5g02533 ACH 26 452 Primary Pumps ATPases gene family AT3G22910 61.136 2.30e-164 488.0
Ftr5g02534 ACH 848 1016 Primary Pumps ATPases gene family AT3G63380 69.822 3.72e-85 268.0
Ftr5g02700 . 1 225 Primary Pumps ATPases gene family AT4G11150 71.556 8.77e-119 336.0
Ftr6g00487 WGDA 1 203 Primary Pumps ATPases gene family AT5G47030 70.476 2.02e-107 305.0
Ftr6g02441 . 83 664 Primary Pumps ATPases gene family AT4G29900 24.422 1.70e-38 151.0
Ftr6g02640 . 263 352 Primary Pumps ATPases gene family AT5G62670 88.889 1.06e-48 165.0
Ftr7g01767 WGDA 1 1014 Primary Pumps ATPases gene family AT4G37640 79.803 0.0 1665.0
Ftr7g02002 . 427 960 Primary Pumps ATPases gene family AT3G47950 85.794 0.0 952.0
Ftr7g02438 . 503 733 Primary Pumps ATPases gene family AT1G72700 58.12 4.54e-85 274.0
Ftr7g02439 . 2 469 Primary Pumps ATPases gene family AT1G72700 58.212 0.0 565.0
Ftr7g02850 . 1 143 Primary Pumps ATPases gene family AT1G75630 96.503 8.78e-94 266.0
Ftr7g02896 . 305 339 Primary Pumps ATPases gene family AT3G47950 94.286 8.43e-18 71.6
Ftr7g02932 . 1 261 Primary Pumps ATPases gene family AT3G58730 73.282 1.09e-137 386.0
Ftr8g00259 . 17 126 Primary Pumps ATPases gene family AT4G02620 89.091 5.91e-73 211.0
Ftr8g00364 WGDA 1 236 Primary Pumps ATPases gene family AT1G64200 77.119 4.99e-128 360.0
Ftr8g00761 ACH 1 70 Primary Pumps ATPases gene family AT5G55290 82.857 1.05e-39 123.0
Ftr8g02095 . 863 974 Primary Pumps ATPases gene family AT1G63440 46.491 6.14e-27 102.0
Ftr9g00253 . 290 349 Primary Pumps ATPases gene family AT5G57350 93.333 2.72e-33 118.0
Ftr9g02085 . 1 623 Primary Pumps ATPases gene family AT1G78900 93.579 0.0 1207.0
Ftr9g02168 . 2 538 Primary Pumps ATPases gene family AT4G30110 65.799 0.0 755.0
Ftr9g02169 . 598 798 Primary Pumps ATPases gene family AT2G19110 51.232 1.08e-52 188.0
Ftr9g02248 . 6 849 Primary Pumps ATPases gene family AT3G42640 79.147 0.0 1375.0
Ftr9g02255 . 1 770 Primary Pumps ATPases gene family AT1G15690 88.052 0.0 1375.0
Ftr10g00528 WGDA 4 104 Primary Pumps ATPases gene family AT4G23710 53.465 4.50e-32 107.0
Ftr10g01236 . 2 1153 Primary Pumps ATPases gene family AT5G04930 67.53 0.0 1641.0
Ftr11g00090 . 1148 1212 Primary Pumps ATPases gene family AT1G59820 64.615 7.15e-26 98.6
Ftr11g00091 . 495 1054 Primary Pumps ATPases gene family AT1G59820 75.357 0.0 917.0
Ftr11g00155 . 58 437 Primary Pumps ATPases gene family AT1G20260 28.788 1.51e-29 120.0
Ftr11g00509 WGDA 1 203 Primary Pumps ATPases gene family AT5G47030 71.014 3.08e-109 310.0
Ftr11g01287 . 2 166 Primary Pumps ATPases gene family AT1G75630 96.988 6.12e-109 306.0
Ftr12g01310 . 1 109 Primary Pumps ATPases gene family AT3G01390 78.899 2.88e-48 148.0
Ftr12g01532 . 709 835 Primary Pumps ATPases gene family AT1G10130 96.063 2.32e-78 248.0
Ftr12g01533 . 887 998 Primary Pumps ATPases gene family AT1G10130 78.261 5.29e-51 170.0
Ftr12g02091 . 34 383 Primary Pumps ATPases gene family AT1G15700 68.994 3.75e-175 491.0
Ftr12g02196 WGDA 1 1014 Primary Pumps ATPases gene family AT4G37640 80.394 0.0 1673.0
Ftr12g02204 . 251 352 Primary Pumps ATPases gene family AT5G62670 81.373 5.61e-50 169.0
Ftr12g02482 . 1 351 Primary Pumps ATPases gene family AT3G28715 92.593 0.0 696.0
Ftr12g03229 . 100 804 Primary Pumps ATPases gene family AT4G37270 70.822 0.0 1002.0
Ftr12g03334 . 229 565 Primary Pumps ATPases gene family AT1G78900 27.92 1.83e-27 115.0
Ftr12g03421 . 8 487 Primary Pumps ATPases gene family AT1G20260 97.083 0.0 960.0
Ftr12g03465 . 1 1020 Primary Pumps ATPases gene family AT1G27770 77.941 0.0 1605.0
Ftr12g03597 ACH,WGDA 1 165 Primary Pumps ATPases gene family AT1G19910 98.788 1.20e-112 315.0
Ftr12g03888 . 1 374 Primary Pumps ATPases gene family AT1G12840 80.214 0.0 641.0
Ftr12g03984 . 7 180 Primary Pumps ATPases gene family AT4G32530 91.954 3.98e-109 307.0
Ftr13g00229 . 1 757 Primary Pumps ATPases gene family AT1G15690 87.583 0.0 1334.0
Ftr13g00305 . 3 948 Primary Pumps ATPases gene family AT4G30190 85.85 0.0 1633.0
Ftr13g02233 WGDA 275 565 Primary Pumps ATPases gene family AT1G78900 27.483 7.78e-24 100.0
Ftr13g02423 . 939 1024 Primary Pumps ATPases gene family AT2G41560 60.674 5.23e-35 123.0
Ftr14g00099 . 6 961 Primary Pumps ATPases gene family AT3G60330 79.041 0.0 1553.0
Ftr14g00355 WGDA 1 237 Primary Pumps ATPases gene family AT1G64200 75.527 8.18e-125 352.0
Ftr15g00257 . 56 278 Primary Pumps ATPases gene family AT4G38510 24.215 1.33e-10 59.7
Ftr15g01722 . 5 364 Primary Pumps ATPases gene family AT2G07560 87.222 0.0 625.0
Ftr15g01723 . 736 931 Primary Pumps ATPases gene family AT2G24520 83.673 1.90e-113 342.0
Ftr15g01725 . 8 427 Primary Pumps ATPases gene family AT4G29900 68.458 0.0 588.0
Ftr15g01818 . 108 1061 Primary Pumps ATPases gene family AT1G07670 81.485 0.0 1600.0
Ftr15g01817 . 1 375 Primary Pumps ATPases gene family AT1G07810 82.4 0.0 614.0
Ftr15g01929 ACH,WGDA 1 1024 Primary Pumps ATPases gene family AT2G41560 68.35 0.0 1459.0
Ftr15g02601 . 366 1227 Primary Pumps ATPases gene family AT1G54280 66.976 0.0 1196.0
Ftr16g00005 . 352 464 Primary Pumps ATPases gene family AT4G29900 57.522 3.47e-29 108.0
Ftr16g00006 . 258 315 Primary Pumps ATPases gene family AT5G57110 79.31 2.57e-26 97.8
Ftr16g00176 . 2 341 Primary Pumps ATPases gene family AT1G15690 81.765 0.0 573.0
Ftr16g00438 ACH,WGDA 1 165 Primary Pumps ATPases gene family AT1G19910 98.788 1.20e-112 315.0
Ftr17g00100 . 39 233 Primary Pumps ATPases gene family AT4G09650 63.59 2.71e-88 259.0
Ftr17g00442 . 365 485 Primary Pumps ATPases gene family AT5G62670 88.43 6.55e-72 229.0
Ftr17g00619 . 1 165 Primary Pumps ATPases gene family AT1G19910 98.788 1.20e-112 315.0
Ftr17g01583 WGDA 1 180 Primary Pumps ATPases gene family AT4G32530 88.889 6.47e-111 312.0
Ftr17g01602 WGDA 1 817 Primary Pumps ATPases gene family AT2G28520 78.703 0.0 1318.0
Ftr18g00304 . 40 382 Primary Pumps ATPases gene family AT4G38510 30.636 1.59e-32 128.0
Ftr18g01723 WGDA 4 104 Primary Pumps ATPases gene family AT4G23710 54.455 4.33e-33 109.0
Ftr10000680.1g00004 . 1144 1198 Primary Pumps ATPases gene family AT1G17500 80.0 7.96e-26 96.7
Ftr10001343.1g00010 . 87 437 Primary Pumps ATPases gene family AT1G20260 27.596 6.03e-28 114.0
Ftr10000849.1g00006 . 738 1189 Primary Pumps ATPases gene family AT1G68710 74.336 0.0 720.0