Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ftr2g00906 | ATGGGCAATTACAGGCTCAGATTATCAACTCTAATCCCCAATTCATGGCTCTACTCCTCCATCACAGCCACCAAACTCAAGAACAAACTAACCAAAACCCAACCCATCACTACTTCATCATCTTCACCCTCATCTTCTTCATCGATTTCAGCATCAAAACCTGCGACTAATCAAAGAAAATCATACTACTTCACCAGAGACCTCGTCGTACCCGACCAGATTACCCGCACTCATGACCCACCGTCGCCTAAAACCGATCACCAACCCGACCCGAGACGAAAATCATCCAAGAAGAAACGACCCATCACCCCAAAGAAACCAATTCGCCGGAAATCAGTGTCGCCGGAGCTCAGCCCCGCCAGAAAATGCAGCTGCGGGAGTCCCCCCGAACAATCTCTCATTCCCCCAAACGACGACGTTTATACGAAAGTTAACCTCCCACCGATCATAACCAAGCCCACGAAGCCAAACGAATTCGGGTCGGGTAAATGGGTGGTCGCCGGAGATCGCCGGAGTTCAACGGCGAACGACGGCGTAACGCGAAGTCCGGCGAGAAAAGCTAAGAACAACATTTATTCTCCTAGGTTGGGGAACAGGGTGAGGATCAACGGGATAAACGCCGGTGGCCGGAGAAGATCCGGCGACCGGCGGAGCTTGTCGGAAAGTATGGTGGTGGTGAAGACGACGGTGGATCCGTTTAGGGATTTTAAGGAATCGATGGTGGAGATGATAATGGGGAATAATATTACGAGTTCTAAAGATTTGGAAGATCTTCTTGCATGTTATTTATCATTGAATTCTGATGAATATCATGATTTGATCATTAAGGTATTTAAGGAAATATGGTTTGAGTGTACTGATGTTAGACTGTAG | 873 | 47.88 | MGNYRLRLSTLIPNSWLYSSITATKLKNKLTKTQPITTSSSSPSSSSSISASKPATNQRKSYYFTRDLVVPDQITRTHDPPSPKTDHQPDPRRKSSKKKRPITPKKPIRRKSVSPELSPARKCSCGSPPEQSLIPPNDDVYTKVNLPPIITKPTKPNEFGSGKWVVAGDRRSSTANDGVTRSPARKAKNNIYSPRLGNRVRINGINAGGRRRSGDRRSLSESMVVVKTTVDPFRDFKESMVEMIMGNNITSSKDLEDLLACYLSLNSDEYHDLIIKVFKEIWFECTDVRL | 290 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ftr2g00906 | 290 | ProSiteProfiles | OVATE domain profile. | 225 | 284 | IPR006458 | - | |
| Ftr2g00906 | 290 | Pfam | DNA-binding domain | 1 | 47 | IPR025830 | GO:0003677(InterPro) | |
| Ftr2g00906 | 290 | Pfam | Transcriptional repressor, ovate | 230 | 284 | IPR006458 | - | |
| Ftr2g00906 | 290 | MobiDBLite | consensus disorder prediction | 93 | 107 | - | - | |
| Ftr2g00906 | 290 | MobiDBLite | consensus disorder prediction | 30 | 63 | - | - | |
| Ftr2g00906 | 290 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 223 | 284 | IPR006458 | - | |
| Ftr2g00906 | 290 | MobiDBLite | consensus disorder prediction | 30 | 140 | - | - | |
| Ftr2g00906 | 290 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 41 | 285 | IPR038933 | GO:0045892(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ftr2g00906 | - | - |
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| 2818139 | Ftr | Ftr2g00906 | Ftr-Chr2:18217501 | Ftr3g02929 | Ftr-Chr3:102185955 | |
| 2843435 | Ftr | Ftr4g00506 | Ftr-Chr4:5768580 | Ftr2g00906 | Ftr-Chr2:18217501 | |
| 3026831 | Ftr | Ftr2g00906 | Ftr-Chr2:18217501 | Ftr2g01215 | Ftr-Chr2:32164707 |
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| Ftr | Ovate | 6.2e-23 | No_clan | TF | OFP |