AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr4g03382 ATGACCTCCGGCGGCGGCGACGACGGCGTCACTAGGGTTCCGATTCCGACCACCGTTCGCAAGCTGATTCAAGACCTCACGAAGACTCTCAAATACAAGCACACCGATGACTTCATCTACACAACGCTCAACGACTCCGGTATGGACCCTACCGAAGCCGCCCGGAGGTTGAAGATGATTCACGACATCAGAGAGATCGCCGGAAAGCACAGCGTGGAGGATGTCTATACAATGCTCAAGGACTGCAATCTCGATGCTAATGAAGCTGCTCAGAGGCTGTTGTACATCGATACTTTCCATGTTGTGAAAAAGAAACATGACCGGAGAAAGACTATAAGCAGTGATGCCTCTCAAGAGAATAAACAGACACGGGGTAATCAATGGAGGGGAGATAAGGGTGGGCGAGGGACTCTCTACTTATCAAAAGTTTTTGAAGATGTCGGAGGAGAGAGAAATTTGAGTTCAGGGAAGGAATATGGTGTTACTAATCGTCCAGAGAGGGTTTTGAGGCCAACCTTGGCAGGTCACATGGGAAAAGAAAACAACGTAGTACATGTGTCCAATTCTTGTGCCAATGTTAATGGTATACCGGCTATATCCAACGGGAGTTACAATCATAAGCTTGCATCATCAGAACTATCTGCAGAGGTTGCATCCTCTGCTTCAGATCATGTTGTGGTTTCATCTCAGAACACCAAGCATGTGTGTGCGATTGGTACAATAAAATGTGAGATTGTAAAACGTAGTGATTCTAATGAATCAAATGCAAGAATTCCAACTGGCAGGAAGTTTAGTGCTGATCAGTTAGGCACTGTCACCATTCCAGTCGTTTCAGAAGCTGCAGATTCTCCCCTAAAATTCAATGTTGCTGAAAAGAATCCGATCTCAGAGATCTTGCAGCCTCTTTCCTTGTCAACCCAAAACAGTACTCAGGTCGTCAGTCCTATTCAGGATAATCAGCAGCCTTCTGAATCTTTAAAGGAGCCTCAAGAAGTGAATGCCTCTGAGCATAAAGATTCAATTCCTGAAGAACCTGAATTGAATATATCATCTCCAAAACATGATGTGATGATAGAGAAATTGACTTTATCTTCTCACCAAGCTGTAATTTTTCCTGATCATCTACAAGTCCCTGAAAATTATAAATGCCAGTTCGTATTTGGAAGTTTGGATGCAGTCCCTGAGGATTGCGAACCTAAATCCGTGACTGATATTCAGCAAAATGAAGCTCTAAAAGAACATTCTTTGAGCAATGGAAATGTTTCTGTAATGGTTCAGGAAGGTGAAATTCAAGATCATGTTTCTGAAAAGGTATTGCCTTCTGATGATAACATATCATCTGATTCTTCTGCTCTAAAACACGAGCAGACAACGGTGGAGATAGTCCCCCCTCCTCCTTCAACAGGATTTCAGAATCTTCCAGTTCTTCAAACTACCAGGGACTACACCTATGGTTATTTGCCACCTCTGGTGGGCTCACATTTTGTACAAGTTGATATACCTGAACTACAGAATGGGAACTCTCAAGCTGTATCTGCAGTGGGCCAACCTACTGTGGCGAAACCTGCACTGACGAACCAGAGTTCTATCACATTATCTCCACCTTTGTTTCCGTATTTCAGACCGTATCCAAACTATATTCCTTATAACCCATATTTCCCACAAATGTATTTGCCTCAAAATGCTCACTTGTTGAACCATGGTGTATTTCCTCATCAACCACCACCACCTACAACCAATGTCCACCATATGCAGGCAGCAGCAGCAGCAGGGGTGAAATTACCTACTCCTTCACAGAACAAAGAAGGAAGTAATGAAGTTGTTACTACATCTGAAGCAAAAGTCAACAATGTTCTTTCAGTTCAACAGGGTGAAGATCTACCAGCTTGGGCTCGCTCGCCGGTTCACGATATACCTACTTTATTGCCAAATTATTTCTACAACTTCCCTCAAGGACAACATATGGCCGCCTTACCATTACAAGCTGCTGCTCTTTATCATTCTTCACAAACAATGACCGCTCAACCTACCATACCACCACCCCTCATGTATCAACCACAACCTACAGGCGCCAAGGTTGAACCCATGGTGCAACCATCTGCCTCTTACCATCAACATCAGCATGCACAACAGGTAAACCACAACGACACTTTGGTAGCGAACACAGGGACCAGTTGA 2178 44.03 MTSGGGDDGVTRVPIPTTVRKLIQDLTKTLKYKHTDDFIYTTLNDSGMDPTEAARRLKMIHDIREIAGKHSVEDVYTMLKDCNLDANEAAQRLLYIDTFHVVKKKHDRRKTISSDASQENKQTRGNQWRGDKGGRGTLYLSKVFEDVGGERNLSSGKEYGVTNRPERVLRPTLAGHMGKENNVVHVSNSCANVNGIPAISNGSYNHKLASSELSAEVASSASDHVVVSSQNTKHVCAIGTIKCEIVKRSDSNESNARIPTGRKFSADQLGTVTIPVVSEAADSPLKFNVAEKNPISEILQPLSLSTQNSTQVVSPIQDNQQPSESLKEPQEVNASEHKDSIPEEPELNISSPKHDVMIEKLTLSSHQAVIFPDHLQVPENYKCQFVFGSLDAVPEDCEPKSVTDIQQNEALKEHSLSNGNVSVMVQEGEIQDHVSEKVLPSDDNISSDSSALKHEQTTVEIVPPPPSTGFQNLPVLQTTRDYTYGYLPPLVGSHFVQVDIPELQNGNSQAVSAVGQPTVAKPALTNQSSITLSPPLFPYFRPYPNYIPYNPYFPQMYLPQNAHLLNHGVFPHQPPPPTTNVHHMQAAAAAGVKLPTPSQNKEGSNEVVTTSEAKVNNVLSVQQGEDLPAWARSPVHDIPTLLPNYFYNFPQGQHMAALPLQAAALYHSSQTMTAQPTIPPPLMYQPQPTGAKVEPMVQPSASYHQHQHAQQVNHNDTLVANTGTS 725
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr4g03382 725 Pfam GBF-interacting protein 1 N-terminal 58 110 IPR009719 -
Ftr4g03382 725 Pfam GBF-interacting protein 1 N-terminal 15 57 IPR009719 -
Ftr4g03382 725 MobiDBLite consensus disorder prediction 309 329 - -
Ftr4g03382 725 SUPERFAMILY UBA-like 58 111 IPR009060 GO:0005515(InterPro)
Ftr4g03382 725 PANTHER FLOCCULATION PROTEIN (DUF1296) 604 714 IPR044277 GO:0051082(PANTHER)
Ftr4g03382 725 MobiDBLite consensus disorder prediction 309 351 - -
Ftr4g03382 725 MobiDBLite consensus disorder prediction 330 350 - -
Ftr4g03382 725 MobiDBLite consensus disorder prediction 107 133 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr4g03382 - -