AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ftr4g03465 | ATGGCATCTGCCTTCCTTTCAAGAACACTCTTTGCTCATCGTTTCGTTTCATCCATAGGAATCAACCAAAACCCCCAAAAATTAGCTTCAGTTTTCTTTAAAAAACCTCTTCAATCGTGGGCTAGTCCAATCCATACGGCATATAGGAGGTCTACCTTGGTTCGTGGTGATATGGCTACAAATGTGGCTGGATCCACAGCTTATTTTTCAACACGGTCCATGTCGACTGGGGAGCCTGTTGTTTCAGTTGACTGGCTCCATGCCAACCTGCGTGAGCCTGATTTGAAGGTGCTGGATGCATCCTGGTACATGCCTGATGAACAAAGAAATCCGCTCCAGGAGTACCAGGTTGCCCACATCCCAGGTGCTCTTTTCTTTGATGTAGATGGGATATCAGATCGAACTACTAATCTACCACACATGTTGCCATCTGAGGAAGCATTTGCTGCTGCTGTTTCTGCTCTTGGTATTGAAAACAAAGATGGAGTTGTTGTTTATGATGGTAAAGGGATCTTCAGTGCTGCTCGTGTCTGGTGGATGTTCCGAGTTTTTGGACATGACAGAGTATGGGTGTTGGATGGAGGGCTTCCCAGATGGCGTGCTTCCGGATTTGATGTTGAGTCTAGTGCTTCTAGTGATTCAATTTTGAAAGCTAGTGCTGCAAGCGAGGCGATAGAGAAAGTATACCAAGGCCAGCCTGTTGGTCCAGTTACATTTCAAACAAAATATCAGCCGCATCTTGTATGGACACTCGAGCAGGTTAAAAAGAACATCGAGGACCAATCACATCAACATATAGATGCTCGATCAAAAGCCAGGTTTGATGGTGTTGCACCTGAGCCTCGAAAAGGAATAAGAAGCGGCCATGTGCCTGGGAGTAAGTGCGTCCCTTTTACCCAGATGTTAGACAGTTCACAGACACTGCTATCTGCAGACCAGCTCAAGAAAAAGTTTGAACAAGAGGGTATTGCATTGGACAAACCTGTCATGACTTCATGTGGGACTGGAGTTACTGCATGCATTCTTGCATTGGGACTCCATCGACTTGGGAAGACAGATGTCCGGTTTATGATGGATCTTGGACAGAATGGGGAGCACAAGAAGAAGTTCCTGTCGCAACTTCAAGTTCAACTTCTTGACATTAACGAGCGTTTTAATTTGGTGGTCTTTTTCGATTTTATTCAACTTCAAATTTTCTGTTTTTTGTTAAACATGATTTTGCCTATGTGGTTAACTCTAGGCAAAAGAGAAACTTGTTTCCTGTTGAACTATGAATCAAGTATCGATTAA | 1290 | 44.03 | MASAFLSRTLFAHRFVSSIGINQNPQKLASVFFKKPLQSWASPIHTAYRRSTLVRGDMATNVAGSTAYFSTRSMSTGEPVVSVDWLHANLREPDLKVLDASWYMPDEQRNPLQEYQVAHIPGALFFDVDGISDRTTNLPHMLPSEEAFAAAVSALGIENKDGVVVYDGKGIFSAARVWWMFRVFGHDRVWVLDGGLPRWRASGFDVESSASSDSILKASAASEAIEKVYQGQPVGPVTFQTKYQPHLVWTLEQVKKNIEDQSHQHIDARSKARFDGVAPEPRKGIRSGHVPGSKCVPFTQMLDSSQTLLSADQLKKKFEQEGIALDKPVMTSCGTGVTACILALGLHRLGKTDVRFMMDLGQNGEHKKKFLSQLQVQLLDINERFNLVVFFDFIQLQIFCFLLNMILPMWLTLGKRETCFLLNYESSID | 429 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ftr4g03465 | 429 | Coils | Coil | 251 | 271 | - | - | |
| Ftr4g03465 | 429 | Pfam | Rhodanese-like domain | 82 | 201 | IPR001763 | - | |
| Ftr4g03465 | 429 | Pfam | Rhodanese-like domain | 250 | 357 | IPR001763 | - | |
| Ftr4g03465 | 429 | FunFam | Sulfurtransferase | 244 | 359 | - | - | |
| Ftr4g03465 | 429 | CDD | TST-Repeat-2 | 250 | 355 | - | - | |
| Ftr4g03465 | 429 | Gene3D | - | 73 | 215 | IPR036873 | - | |
| Ftr4g03465 | 429 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 244 | 357 | IPR036873 | - | |
| Ftr4g03465 | 429 | CDD | TST-Repeat-1 | 80 | 203 | - | - | |
| Ftr4g03465 | 429 | ProSiteProfiles | Rhodanese domain profile. | 91 | 208 | IPR001763 | - | |
| Ftr4g03465 | 429 | FunFam | Sulfurtransferase | 73 | 215 | - | - | |
| Ftr4g03465 | 429 | Gene3D | - | 244 | 359 | IPR036873 | - | |
| Ftr4g03465 | 429 | ProSiteProfiles | Rhodanese domain profile. | 259 | 369 | IPR001763 | - | |
| Ftr4g03465 | 429 | SMART | rhod-4 | 81 | 205 | IPR001763 | - | |
| Ftr4g03465 | 429 | SMART | rhod-4 | 249 | 366 | IPR001763 | - | |
| Ftr4g03465 | 429 | ProSitePatterns | Rhodanese signature 1. | 115 | 126 | IPR001307 | GO:0004792(InterPro) | |
| Ftr4g03465 | 429 | MobiDBLite | consensus disorder prediction | 269 | 289 | - | - | |
| Ftr4g03465 | 429 | PANTHER | THIOSULFATE SULFERTANSFERASE | 76 | 354 | IPR045078 | GO:0004792(PANTHER)|GO:0005739(PANTHER)|GO:0016783(InterPro) | |
| Ftr4g03465 | 429 | SUPERFAMILY | Rhodanese-Cell cycle control phosphatase | 78 | 210 | IPR036873 | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ftr4g03465 | K01011 | thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Ftr1g00409 | . | 56 | 242 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 38.743 | 2.57e-32 | 121.0 | |
| Ftr2g00999 | . | 7 | 198 | Sulfurtransferasese/Rhodanese gene family | AT3G08920 | 57.426 | 9.05e-82 | 241.0 | |
| Ftr3g00153 | . | 94 | 299 | Sulfurtransferasese/Rhodanese gene family | AT5G19370 | 68.75 | 3.24e-106 | 309.0 | |
| Ftr3g00366 | . | 72 | 261 | Sulfurtransferasese/Rhodanese gene family | AT5G55130 | 24.424 | 1.02e-10 | 61.6 | |
| Ftr4g03465 | . | 1 | 354 | Sulfurtransferasese/Rhodanese gene family | AT1G79230 | 72.905 | 0.0 | 546.0 | |
| Ftr5g00188 | . | 1 | 292 | Sulfurtransferasese/Rhodanese gene family | AT4G24750 | 65.552 | 9.63e-141 | 396.0 | |
| Ftr5g01778 | . | 350 | 564 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 25.439 | 1.57e-14 | 71.6 | |
| Ftr5g01779 | . | 344 | 564 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 28.509 | 2.61e-16 | 75.9 | |
| Ftr5g02081 | . | 1 | 233 | Sulfurtransferasese/Rhodanese gene family | AT2G42220 | 65.254 | 1.34e-110 | 315.0 | |
| Ftr7g01367 | . | 24 | 120 | Sulfurtransferasese/Rhodanese gene family | AT5G66040 | 68.041 | 1.19e-47 | 149.0 | |
| Ftr10g01021 | WGDA | 24 | 149 | Sulfurtransferasese/Rhodanese gene family | AT2G17850 | 53.543 | 6.28e-42 | 135.0 | |
| Ftr10g01189 | . | 346 | 564 | Sulfurtransferasese/Rhodanese gene family | AT1G09280 | 27.511 | 1.43e-14 | 70.1 | |
| Ftr12g00153 | . | 4 | 438 | Sulfurtransferasese/Rhodanese gene family | AT1G17850 | 56.532 | 3.77e-174 | 492.0 | |
| Ftr13g01515 | . | 172 | 222 | Sulfurtransferasese/Rhodanese gene family | AT4G27700 | 82.353 | 2.77e-26 | 93.2 | |
| Ftr13g01516 | . | 1 | 162 | Sulfurtransferasese/Rhodanese gene family | AT4G27700 | 61.078 | 4.83e-66 | 199.0 | |
| Ftr14g00013 | . | 1 | 456 | Sulfurtransferasese/Rhodanese gene family | AT4G01050 | 51.579 | 1.13e-137 | 402.0 | |
| Ftr14g00462 | . | 10 | 116 | Sulfurtransferasese/Rhodanese gene family | AT5G66040 | 54.206 | 2.32e-39 | 127.0 | |
| Ftr17g01611 | . | 17 | 144 | Sulfurtransferasese/Rhodanese gene family | AT5G03455 | 70.0 | 3.50e-66 | 196.0 | |
| Ftr17g01995 | . | 147 | 348 | Sulfurtransferasese/Rhodanese gene family | AT5G23060 | 30.435 | 2.96e-19 | 88.2 | |
| Ftr18g01185 | WGDA | 5 | 147 | Sulfurtransferasese/Rhodanese gene family | AT2G17850 | 52.083 | 2.34e-46 | 146.0 | |
| Ftr10000909.1g00003 | . | 94 | 474 | Sulfurtransferasese/Rhodanese gene family | AT2G40760 | 74.803 | 0.0 | 587.0 | |
| Ftr10000698.1g00001 | . | 42 | 222 | Sulfurtransferasese/Rhodanese gene family | AT4G27700 | 78.453 | 2.68e-108 | 309.0 | |
| Ftr10000068.1g00003 | . | 96 | 179 | Sulfurtransferasese/Rhodanese gene family | AT5G19370 | 34.021 | 2.41e-08 | 49.7 |