AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr4g03500 ATGCTGAAAATGGATCAAGTGAAGCAAGAAGCGATGGCCGATGACACACTAATTGGTCCTGAAAAGCGAAAACGTGGTCGCCCACGAAAGGATCCAAGTGAAAGACGGCACGAAAGAGCACATTCTCGAGCGACTGCTAACGTGCCGCCAGGTTTTAAACAACTGCCTCGGGTTGACCCAATTAACGATCCAACTGAAGTTATGGTTGGGCAGACTGTAACTGGTGTTGTTCAGGCAACTTTTGATGCGGGTTACCTGCTTGCAGTTAGGATTGGGAATTCAAATATAACACTAACAGGTGCAGTTTTTAAGTCGGGTCATACTGCACCCGTGACACCTGAGAATGACGTGGCACCTCTTGCTGAAATGATCAAACGAACAGAAATTCCGTTTCCAACAGGTCTCCAGCCAAAACGTAGGCGTAAACGAAGATCAAAAGAGAATAATATGCAGCTTGTTACTTGTGTTGGAAACGGGTCAGACCCTGTGGTTACAAACTCAGGACCTAAGACCGACTATGTGCTACCTCCCTCAGTCCCACAAGTTGGTGCAAGAGGCACCGTGGTCCCTGTTGTTCTTAAACCAATTAACCTATCAAACGGTTTATCTATCAACAAACCCGCGCCTCATTTGCGGGCCTCACAAGGCAAGCCTATGCACTCAATTCTGCCATTGGCTGTTTACCCACCAAACAGGCCAACAAGTCCAGCGCCTGATTCTCTAAGTAGCTCACAGTTTATGGTTACACCCTCTCAGTCTGGAAATGAGAATGCTTTTTTAAAACATGCAGAAGGGGGTAAAGCTGTAAAATCAAGTGAGGTCCAGTATCGAGTTGTGAAAAGAGAACCAGGTATTGGTGATATGAATGAGCCTATTTTTGTTGAACCACTGCAAACTCGACACATGGTTCAAAATTTCCAACCGCATGTGCTATTCGGAGGTGCGATACATGGTGGCGCCGGGAGAATGACAGAACTTTTGCAGAAAATGGGTGATGATCAGGTTTCTCGAAATGAACATCCAACTGCAAGTTACAATGGGAGTGGTCAGGCGGGAAGGATGTAA 1065 46.29 MLKMDQVKQEAMADDTLIGPEKRKRGRPRKDPSERRHERAHSRATANVPPGFKQLPRVDPINDPTEVMVGQTVTGVVQATFDAGYLLAVRIGNSNITLTGAVFKSGHTAPVTPENDVAPLAEMIKRTEIPFPTGLQPKRRRKRRSKENNMQLVTCVGNGSDPVVTNSGPKTDYVLPPSVPQVGARGTVVPVVLKPINLSNGLSINKPAPHLRASQGKPMHSILPLAVYPPNRPTSPAPDSLSSSQFMVTPSQSGNENAFLKHAEGGKAVKSSEVQYRVVKREPGIGDMNEPIFVEPLQTRHMVQNFQPHVLFGGAIHGGAGRMTELLQKMGDDQVSRNEHPTASYNGSGQAGRM 354
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr4g03500 354 MobiDBLite consensus disorder prediction 332 354 - -
Ftr4g03500 354 MobiDBLite consensus disorder prediction 1 43 - -
Ftr4g03500 354 PANTHER AT HOOK MOTIF-CONTAINING PROTEIN 4 341 IPR045881 -
Ftr4g03500 354 MobiDBLite consensus disorder prediction 337 354 - -
Ftr4g03500 354 MobiDBLite consensus disorder prediction 237 252 - -
Ftr4g03500 354 MobiDBLite consensus disorder prediction 1 57 - -
Ftr4g03500 354 MobiDBLite consensus disorder prediction 233 252 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr4g03500 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
2840694 Ftr Ftr15g00547 Ftr-Chr15:17700983 Ftr4g03500 Ftr-Chr4:117963070
2843813 Ftr Ftr4g03519 Ftr-Chr4:118092305 Ftr4g03500 Ftr-Chr4:117963070
2985984 Ftr Ftr15g00546 Ftr-Chr15:17699787 Ftr4g03500 Ftr-Chr4:117963070