AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr4g03586 ATGACGCATAAACAAGAAACTTTGCTTGGTTCTGGAGCTTGTGTAGCGGTTACTGTCCTTTTATCATTGAAGCTGTTTAGTGATCATCTTTCTCATTGGAAGAAACCCAAAGAACAGAAGGCGATTCTAGTGATTATTCTCATGGCACCTATTTATGCTGTTGATTCTTATGTTGGGTTGCTTGATATTCGTGGCAGTGAGACGTTTTTTGTGTTCTTGGATTCGATCAAAGAATGCTACGAGGGTCTGGTGATGGCCAAGTTCTTGGCTTTGTTATACACTTATTTGAATATATCTATTAGCAAGAACATAGTCCCTGATGAGATCAAAGGAAGAGAGATCCACCATTCATTTCCGATGACTCTCTTTCAACCTCATATGGTTCGTTTGAACCATCAAAACCTAAAGCTCCTTAAGTATTGGACATGGCAGTTTGTAGTGATCCGCCCTGTGTGCTCTGTCTTGATGATAGTTTTGCAAATGCTTGACATGTATCCCGATTGGCTTAGCTGGACAATCACTATGATCTTGAATGTATCAGTTTCCTTAGCATTATACGCACTTGTGGTTTTCTATCATGTATTTGCTAAAGAATTGGCGCCACATAAACCACTTGCCAAGTTCTTATGTGTCAAAGGGATCGTTTTCTTCTGTTTTTGGCAGGGAGTTGTACTGAGTGGTCTGGTGGCAATGGGCATAATCAAGTCCAATCACTTCTGGCTCGATGTGGAGCATATCCAGCAAGCGCTGCAGAATGCATTGGTGATCTTTGAGATGGTGTTTTTCTCGATCTTTCAGCTGTATGCATACTCTGCTGCACCATACAAGGATCTTGATTTGAAAGAGAAGAAGAAAGAGTGA 861 41.0 MTHKQETLLGSGACVAVTVLLSLKLFSDHLSHWKKPKEQKAILVIILMAPIYAVDSYVGLLDIRGSETFFVFLDSIKECYEGLVMAKFLALLYTYLNISISKNIVPDEIKGREIHHSFPMTLFQPHMVRLNHQNLKLLKYWTWQFVVIRPVCSVLMIVLQMLDMYPDWLSWTITMILNVSVSLALYALVVFYHVFAKELAPHKPLAKFLCVKGIVFFCFWQGVVLSGLVAMGIIKSNHFWLDVEHIQQALQNALVIFEMVFFSIFQLYAYSAAPYKDLDLKEKKKE 286
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr4g03586 286 SMART Solute-trans-a-2 7 275 IPR005178 -
Ftr4g03586 286 Pfam Organic solute transporter Ostalpha 9 275 IPR005178 -
Ftr4g03586 286 PANTHER ORGANIC SOLUTE TRANSPORTER-RELATED 7 279 IPR005178 GO:0005215(PANTHER)|GO:0006810(PANTHER)|GO:0016021(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr4g03586 K14360 organic solute transporter subunit alpha
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr13:20397011 Ftr4g03586 Ftr-Chr4:119195640 dispersed