AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr4g03587 ATGACGGCAATCTTATCCTTGGGTACATCCCCAATCAACTTGAAGGTGATTAAGAATTCAACGAGAACCGTAGTTCCATTACAGTCCACCTCTCGAATCGCCATACCTAATAATCATCAACAACCTGCTCCTTTGTTTGTTCCAGAGGTTGAAAGTGCAGTTGATAACTTGTATCCTGAATTCAGGGCCATTGATAATCTTGTGGCACGCAATACATCTAGAGTTCTTAAAGCTTTTCAGAATGCTAGGGTTGGGTCTCATCACTTTGGTGGTTGCACTGGCTATGGCCATGAAGAAGCCGGGGGCCGAGAAGCCCTTGACCAAGCTTTTGCCGAAATATTTGGCGCTGAATCTGCAATTGTTCGCTCTCAGTTCTTCTCGGGGACTCATGCTATTACCTGTGCCCTTTTTGCTTTCTTGAGACCAGGTGATGAGCTTTTGGCTGTTGCTGGTGCTCCTTATGATACACTGGAGGAAGTTATAGGAATCAGGGATGACAATGGCATAGGTTCCTTAAAAGATTTTGGAATCAGTTATCGAGAAGTTGCACTTGCAGATGATGGAGGGCTTGATTGGGATGCTCTTGAGGTTGCTTTAAGACCTCAAACGAAATGTGCTCTTATTCAAAGATCATGTGGGTATTCTTGGCGTAAAAGTTTAAGTGTGAATGAAATTTCTAGAGCAATACATATCATCAAGTCGCAAAATCCAAATTGTATGGTTATGGTGGATAATTGCTATGGTGAATTCACCGAAGCCATTGAACCTCCAATGGTGGGTGCAGATCTTATTGCAGGAAGTTTAATTAAAAATCCAGGTGGAACAATCGCACCATGTGGCGGATACGTTGCAGGGAAAGAAAAATGGGTAAAAGCAGCAGCAGCCCGTCTCTCTGCACCAGGTCTTGGCATTGATTGCGGGTCAACTCCCGGTGATATCATGAGAACATTTTTTCAAGGATTATATCTCTCACCTCAAATGGTTGGGGAAGCAATTAAGGGAGGTTTACTTATCGCTGAAGTTATGTCCACACAAGGTTACAAAGTCCAGCCACTTCCTCGAGTACCCCGTCACGACATAGTACAGGCGGTACAACTTGGAAGCCGTGAAAAGCTTCTTGCTTTCTGTGAGGCTGTACAAAGAAGCTCACCTGTAAGCTCTTACACAAAACCGATCGCAGGCTTGACAGCTGGCTATGCATCCGAGGTGATCTTTGCTGACGGGACATTTATAGACGGCAGCACGAGCGAACTCTCGTGTGATGGACCGTTAAGAGAGCCTTTCTGCGTGTTCTGTCAGGGTGGCACTCACTGGACTCAGTGGGGCCTAGTTCTGGGTGAGGTTTTGAATTCTTTGTAG 1359 45.33 MTAILSLGTSPINLKVIKNSTRTVVPLQSTSRIAIPNNHQQPAPLFVPEVESAVDNLYPEFRAIDNLVARNTSRVLKAFQNARVGSHHFGGCTGYGHEEAGGREALDQAFAEIFGAESAIVRSQFFSGTHAITCALFAFLRPGDELLAVAGAPYDTLEEVIGIRDDNGIGSLKDFGISYREVALADDGGLDWDALEVALRPQTKCALIQRSCGYSWRKSLSVNEISRAIHIIKSQNPNCMVMVDNCYGEFTEAIEPPMVGADLIAGSLIKNPGGTIAPCGGYVAGKEKWVKAAAARLSAPGLGIDCGSTPGDIMRTFFQGLYLSPQMVGEAIKGGLLIAEVMSTQGYKVQPLPRVPRHDIVQAVQLGSREKLLAFCEAVQRSSPVSSYTKPIAGLTAGYASEVIFADGTFIDGSTSELSCDGPLREPFCVFCQGGTHWTQWGLVLGEVLNSL 452
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr4g03587 452 PANTHER CYS OR MET METABOLISM PYRIDOXAL-PHOSPHATE-DEPENDENT ENZYME 21 452 IPR009651 -
Ftr4g03587 452 Pfam Methionine gamma-lyase 50 450 IPR009651 -
Ftr4g03587 452 Gene3D - 98 306 IPR015421 -
Ftr4g03587 452 Gene3D - 307 452 - -
Ftr4g03587 452 Gene3D - 47 97 - -
Ftr4g03587 452 SUPERFAMILY PLP-dependent transferases 74 424 IPR015424 -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr4g03587 - -