AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr4g03605 ATGACTGGAGTGCCATTGGATTTAAGACCACAGAGTTATGGATCACCACAACAGGCGCAAAATGGTTCGTTGCAGACTCAAAATGGGTTCACTGCACGAAAGACTTCGAGGATGTCCCTCTCTGGTTCAAGGGAGAAAGATAAATTTCTTCCTTTTTTGTGTAGATATCTAAGTAGAAAGAAGATTGTGATGATGGTTTTAGCTACATTTGCACTCATGGCTTTCCTATCAGGGTTCTTTACGGCCAGTAGAGAAGATGCATCAGAGAGCTCGATCTTCAATCATTTTAGTGATGCTTATAATACCTCTTTTCAGTTCTCCAGAACGTTTCATGGTCAGAAAGATGATAATTCTAATATACAAGGAACACTGTCGGTATGTGAAGAAAACCCTCCTACCCGGCATTCTTTCAGTGCATCACATTCCACAGGATCTGTCCCTTCTCATAGCAATTATTGTCAAAATTTTGCATTTCCACCCCCTCCTCCAGGTGATAGGAGGCGGCCTGGACCTAGACCGTGTCCTGTGTGTTACCTTCCAGTGGAGGAAGCTATGGCTAGCATGCCGAGTGCCACGTCAGGATCACCTGTTCTTCAACACTTAACTTATTTTCATGAGGAGACTTCTACTAAAACCGAACCACATGAAGGCTCAGATTTTGGTGGGTATCCTTCCATAAAGCAAAGGAATGAATCTTTTGATATTAAAGAATCAATGACTGTACATTGTGGGTTTGTAAAAGGTTGCAGACCTGGTTACAAAACTGGATTTGATATCGATGTATCTGATCTTGTGGAGTTGGAGCAATTTCATGATGTTATTGTTGCATCAGCCATATTTGGAAACTATGATGTAATTCAGCAGCCAACTAAGATAAGTGAGGCTGCAAGTAAAAACATACCATTTTATATGTTTATTGATGAAGAAACTGAAGCATATATGAGAAATACTAGCGCTTTAGACTATAGAATGAAGGTTGGATTATGGAGAATTATTGTTGTGCATAATGTTCCTTACACGGATTCTAGACGAAATGGAAAGGTCCCGAAGCTTTTACTACACAGACTCTTTCCAAATGTTCGGTATTCCATATGGATTGACGGAAAGCTGCAACTTGTTGTGGACCCATATCAACTTCTTGAAAGGTTTTTGTGGCGCCACAATGCTACTTTTGCGATTTCAAAACATTATAGGCGGTTTGATGTGTTTGAAGAAGCTGAAGCTAATAAAGCTGCAGGGAAATACGACAATGCGTCCATTGATTACCAGATTAACTTTTACAAAAATGAGGGTCTAACACCTTATTCTGAGGCTAAGCTTCCTATAATCAGTGATGTTCCGGAAGGGTGTGTCATCATAAGAGAACATATTCCAATAACGAATCTCTTCACGTGTTTGTGGTTCAATGAAGTTGACCGGTTTACCTCAAGAGATCAGTTAAGTTTTGCTACTGTAAGAGACAAAATCATGGCTCAAGTCAACTGGAGTATTAATATGTTTATGGATTGTGAAAGAAGGAATTTTGTAATACAGGCATACCATAGAGATCTACTAGAGCACATGCCACCACCTGCTGCTAAAATAAGCAGCTCAAGACGGGCACGAGTTAATGTTCCTGTTACAGTTCCTATACCTGTGAGAGGTAATAATTCATCTGCCAAAAGTTCGGTAAAGAAAAACACTGTTAAACGGGGGAAAGGAGAGAGGAGATCTCGTTCCAGAAGGCGTTCGAAAAATCCCAGTAATAGGGATAACACGTTCATTTGA 1767 40.24 MTGVPLDLRPQSYGSPQQAQNGSLQTQNGFTARKTSRMSLSGSREKDKFLPFLCRYLSRKKIVMMVLATFALMAFLSGFFTASREDASESSIFNHFSDAYNTSFQFSRTFHGQKDDNSNIQGTLSVCEENPPTRHSFSASHSTGSVPSHSNYCQNFAFPPPPPGDRRRPGPRPCPVCYLPVEEAMASMPSATSGSPVLQHLTYFHEETSTKTEPHEGSDFGGYPSIKQRNESFDIKESMTVHCGFVKGCRPGYKTGFDIDVSDLVELEQFHDVIVASAIFGNYDVIQQPTKISEAASKNIPFYMFIDEETEAYMRNTSALDYRMKVGLWRIIVVHNVPYTDSRRNGKVPKLLLHRLFPNVRYSIWIDGKLQLVVDPYQLLERFLWRHNATFAISKHYRRFDVFEEAEANKAAGKYDNASIDYQINFYKNEGLTPYSEAKLPIISDVPEGCVIIREHIPITNLFTCLWFNEVDRFTSRDQLSFATVRDKIMAQVNWSINMFMDCERRNFVIQAYHRDLLEHMPPPAAKISSSRRARVNVPVTVPIPVRGNNSSAKSSVKKNTVKRGKGERRSRSRRRSKNPSNRDNTFI 588
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr4g03605 588 MobiDBLite consensus disorder prediction 544 558 - -
Ftr4g03605 588 MobiDBLite consensus disorder prediction 559 577 - -
Ftr4g03605 588 Pfam TOD1-MUCI70, glycosyltransferase-like domain 201 514 IPR048354 -
Ftr4g03605 588 PANTHER ALKALINE CERAMIDASE-RELATED 35 552 IPR006852 -
Ftr4g03605 588 MobiDBLite consensus disorder prediction 1 39 - -
Ftr4g03605 588 MobiDBLite consensus disorder prediction 11 38 - -
Ftr4g03605 588 MobiDBLite consensus disorder prediction 541 588 - -
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr4g03605 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr4:5009995 Ftr4g03605 Ftr-Chr4:119493255 transposed
Ftr Ftr-Chr9:49672548 Ftr4g03605 Ftr-Chr4:119493255 transposed
Ftr Ftr-Chr1:84690674 Ftr4g03605 Ftr-Chr4:119493255 wgd