AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr4g03619 ATGTCACTTTTGGGTTGTTTTCGTAGTCATTTCATCAAACACCTTTCGTGCACTCCATTCTCATCGGTTCGAACCACTGCAAATCTCACTCCGTTGTGCCTTTTCAAGCTAATTGGTTCCACCACAGACCACCCATCAAGAAATTTGAGAGACTTTTTGAATTCGAGGTCAGTTACTGCAGCATTTTCATCATCTCCAACCACTGGTGCATACCTTTCTGTTGATATTCAAAGTCGTCAAGATGTTGCGGATATGCTTTCTGAAGCGCTTTTATGTTTTGGAGCTGTTTCAACAAGTGTGTTTGAACCCGACAACCGCGAATCGAACGATGAGATTTCGATTGTTTCGATATTCGCTGTATCTCATGATGTGCATCAAAGTATTGCATTGGCTGCTGATTCAATAGGCTTGAAAGAAACACCTGCTTACAAAGTCACCACAGGATACCAGTCTGATTGGATCGAAAATTCTAAGGAATCTTTTCATCCTGTTGAAGTAACAGAAGGCCTTTGGATTGTACCCGAGTGGAAAACTCCCCCGGACGTCCATGCAACAATAATAAGTCTAAACCCAGGGCTTGCTTTTGGAACCGGCGACCACCCAACTACCAAATTATGTCTGCTATTATTGCACGAATTAATCAAAGGTGGTGAAAAAGTTTTGGATTATGGCACAGGTTCAGGGATTCTTGCCATTGCAGCACTAAAGTTTGGTGCAGCCTCAGCTGTTGGGTTCGATATAGATCCTCAAGCCATAACAGAAGCACATCATAACGCTGCTTTGAACAACATAGGACCCGATAAACTGGAACTGCAGGTTGTTCCCAGTAACTTTAGCCCCATGTCAACAGACCAATGGCAATGGGGTATGAAGAGTGATGGTGTAACAGAGCATGGTGTGGAAATTATTAATGTGAAGGAGAAGTATGATGTGGTAGTTGCAAATATTCTTTTGAACCCGTTGTTAGATTTGGCTGATCATATTGTTTCTTACGCTAAACCTGGTGGTGTTGTCGGTCTCTCTGGTATTATCTTAGAGCAGGTACCTACCGTTGTGGACCGATACTCGGATCTTTTGGAAGGGATTACTGTGTCACAGATTGATGACTGGGCGTGCATACGTGGCACAAAGAAGACTGGGTAG 1143 43.31 MSLLGCFRSHFIKHLSCTPFSSVRTTANLTPLCLFKLIGSTTDHPSRNLRDFLNSRSVTAAFSSSPTTGAYLSVDIQSRQDVADMLSEALLCFGAVSTSVFEPDNRESNDEISIVSIFAVSHDVHQSIALAADSIGLKETPAYKVTTGYQSDWIENSKESFHPVEVTEGLWIVPEWKTPPDVHATIISLNPGLAFGTGDHPTTKLCLLLLHELIKGGEKVLDYGTGSGILAIAALKFGAASAVGFDIDPQAITEAHHNAALNNIGPDKLELQVVPSNFSPMSTDQWQWGMKSDGVTEHGVEIINVKEKYDVVVANILLNPLLDLADHIVSYAKPGGVVGLSGIILEQVPTVVDRYSDLLEGITVSQIDDWACIRGTKKTG 380
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr4g03619 380 Gene3D Vaccinia Virus protein VP39 160 379 IPR029063 -
Ftr4g03619 380 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 140 373 IPR029063 -
Ftr4g03619 380 Hamap Ribosomal protein L11 methyltransferase [prmA]. 67 377 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Ftr4g03619 380 Pfam Ribosomal protein L11 methyltransferase (PrmA) 71 378 - -
Ftr4g03619 380 CDD AdoMet-MTases 219 338 - -
Ftr4g03619 380 NCBIfam 50S ribosomal protein L11 methyltransferase 100 370 IPR004498 GO:0006479(InterPro)|GO:0008276(InterPro)
Ftr4g03619 380 PANTHER ELECTRON TRANSFER FLAVOPROTEIN BETA SUBUNIT LYSINE METHYLTRANSFERASE 71 378 IPR050078 GO:0005739(PANTHER)|GO:0008276(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr4g03619 K02687 ribosomal protein L11 methyltransferase [EC:2.1.1.-]