AGRP
Asteraceae Genomic Research Platform
Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ftr4g03647 | ATGGCGGCTTCTGCAGAACGTGAAAACTTCATCTATGTTGCTAAACTTGCGGAGCAAGCCGAACGCTATGACGAGATGGTGGATGCCATGAAGAAAGTTGCAAATTTGGATGTCGAATTAACTGTTGAGGAGAGAAATTTGCTGTCAGTTGGATACAAGAATGTGGTGGGTTCACGTAGGGCATCATGGAGGATATTGTCTTCCATTCAGCAAAAAGAGGAGTCAAGAGGAAATGAAGTTAATGTAAAGCGGATTAAGGAATATAGGCAGAAGGTGGAAACCGAGCTGTCTAATATTTGCAATGATATCATGACTGTGATCGATGAGCATCTGATTCCATCTTCCTCCGCTGGAGAATCTACTGTTTTCTACTACAAGATGAAAGGGGACTATTATAGGTATCTTGCAGAGTTCAAGTCTGGTGATGACAAAAAAGAAGCAGCTGATCTGTCACTGAAGGCTTATGAATCGGCTTCTACCGCTGCAAAGGATTTATCTCCTACTCATCCCATCCGATTGGGCTTGGCTTTGAACTTCTCGGTTTTCTATTATGAGATTATGAACTCTCCTGAAAGAGCCTGCCACCTGGCAAAACAAGCTTTTGATGAAGCTATTTCAGAACTTGACTCTTTGAGTGAGGAGTCATACAAAGATAGCACTTTGATTATGCAGCTCCTGAGGGACAACCTCACTTTGTGGACTTCTGACATTCCAGAGGATGGAGAAGACCAAAAGATGGAGATCACCAAATCTGGTGCAGGAGACGCTGAGTAA | 774 | 43.15 | MAASAERENFIYVAKLAEQAERYDEMVDAMKKVANLDVELTVEERNLLSVGYKNVVGSRRASWRILSSIQQKEESRGNEVNVKRIKEYRQKVETELSNICNDIMTVIDEHLIPSSSAGESTVFYYKMKGDYYRYLAEFKSGDDKKEAADLSLKAYESASTAAKDLSPTHPIRLGLALNFSVFYYEIMNSPERACHLAKQAFDEAISELDSLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDQKMEITKSGAGDAE | 257 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ftr4g03647 | 257 | ProSitePatterns | 14-3-3 proteins signature 2. | 216 | 235 | IPR023409 | - | |
| Ftr4g03647 | 257 | FunFam | 14-3-3 protein epsilon | 2 | 247 | - | - | |
| Ftr4g03647 | 257 | MobiDBLite | consensus disorder prediction | 236 | 257 | - | - | |
| Ftr4g03647 | 257 | Pfam | 14-3-3 protein | 14 | 234 | IPR023410 | - | |
| Ftr4g03647 | 257 | Gene3D | - | 1 | 249 | IPR036815 | - | |
| Ftr4g03647 | 257 | Coils | Coil | 194 | 214 | - | - | |
| Ftr4g03647 | 257 | SMART | 1433-4 | 7 | 247 | IPR023410 | - | |
| Ftr4g03647 | 257 | PRINTS | 14-3-3 protein zeta signature | 39 | 68 | IPR000308 | - | |
| Ftr4g03647 | 257 | PRINTS | 14-3-3 protein zeta signature | 88 | 112 | IPR000308 | - | |
| Ftr4g03647 | 257 | PRINTS | 14-3-3 protein zeta signature | 153 | 179 | IPR000308 | - | |
| Ftr4g03647 | 257 | PRINTS | 14-3-3 protein zeta signature | 207 | 236 | IPR000308 | - | |
| Ftr4g03647 | 257 | PRINTS | 14-3-3 protein zeta signature | 180 | 206 | IPR000308 | - | |
| Ftr4g03647 | 257 | PRINTS | 14-3-3 protein zeta signature | 119 | 141 | IPR000308 | - | |
| Ftr4g03647 | 257 | PIRSF | 14-3-3 | 1 | 246 | IPR000308 | - | |
| Ftr4g03647 | 257 | MobiDBLite | consensus disorder prediction | 238 | 257 | - | - | |
| Ftr4g03647 | 257 | PANTHER | 14-3-3 PROTEIN | 6 | 239 | IPR000308 | GO:0005737(PANTHER)|GO:0007165(PANTHER)|GO:0034613(PANTHER) | |
| Ftr4g03647 | 257 | SUPERFAMILY | 14-3-3 protein | 6 | 236 | IPR036815 | - | |
| Ftr4g03647 | 257 | ProSitePatterns | 14-3-3 proteins signature 1. | 45 | 55 | IPR023409 | - | |
| Ftr4g03647 | 257 | Coils | Coil | 13 | 33 | - | - |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ftr4g03647 | K06630 | 14-3-3 protein epsilon |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 97328 | Ftr14g00806 | Ftr4g03647 | |
| 98115 | Ftr4g03647 | Ftr8g00882 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ftr | Ftr-Chr15:12296290 | Ftr4g03647 | Ftr-Chr4:120107812 | dispersed | |
| Ftr | Ftr-Chr4:120107812 | Ftr7g02759 | Ftr-Chr7:102578983 | dispersed | |
| Ftr | Ftr-Chr14:11919536 | Ftr4g03647 | Ftr-Chr4:120107812 | wgd | |
| Ftr | Ftr-Chr15:12631517 | Ftr4g03647 | Ftr-Chr4:120107812 | wgd | |
| Ftr | Ftr-Chr4:120107812 | Ftr8g00882 | Ftr-Chr8:10755917 | wgd |
| Select | Gene | Event_type | S_start | S_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|---|
| Ftr1g02451 | WGDA | 6 | 146 | 14-3-3 family | AT1G26480 | 83.688 | 2.42e-83 | 244.0 | |
| Ftr3g00056 | . | 6 | 246 | 14-3-3 family | AT4G09000 | 89.669 | 2.76e-160 | 444.0 | |
| Ftr4g03647 | ACH | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 6.11e-147 | 409.0 | |
| Ftr5g01812 | . | 5 | 247 | 14-3-3 family | AT5G10450 | 86.008 | 4.73e-158 | 437.0 | |
| Ftr7g02759 | WGDA | 9 | 198 | 14-3-3 family | AT1G34760 | 80.628 | 2.34e-111 | 317.0 | |
| Ftr7g02760 | . | 224 | 263 | 14-3-3 family | AT2G42590 | 67.5 | 7.42e-11 | 52.0 | |
| Ftr8g00882 | ACH,WGDA | 1 | 263 | 14-3-3 family | AT2G42590 | 76.426 | 1.64e-150 | 419.0 | |
| Ftr10g00956 | . | 3 | 200 | 14-3-3 family | AT3G02520 | 87.879 | 5.09e-131 | 367.0 | |
| Ftr10g00957 | . | 171 | 252 | 14-3-3 family | AT5G38480 | 65.06 | 5.94e-31 | 107.0 | |
| Ftr11g00139 | . | 6 | 264 | 14-3-3 family | AT1G26480 | 81.467 | 7.15e-158 | 437.0 | |
| Ftr12g03360 | . | 1 | 257 | 14-3-3 family | AT3G02520 | 87.938 | 4.26e-167 | 461.0 | |
| Ftr13g02337 | WGDA | 6 | 256 | 14-3-3 family | AT1G26480 | 85.714 | 2.50e-161 | 446.0 | |
| Ftr14g00806 | ACH,WGDA | 1 | 263 | 14-3-3 family | AT2G42590 | 76.806 | 2.99e-149 | 415.0 | |
| Ftr15g00413 | . | 1 | 244 | 14-3-3 family | AT2G42590 | 80.738 | 4.19e-149 | 415.0 | |
| Ftr15g00420 | . | 1 | 244 | 14-3-3 family | AT2G42590 | 80.738 | 4.19e-149 | 415.0 | |
| Ftr15g02337 | WGDA | 6 | 263 | 14-3-3 family | AT2G42590 | 76.448 | 2.46e-147 | 410.0 | |
| Ftr16g01243 | . | 2 | 256 | 14-3-3 family | AT1G78300 | 85.547 | 2.83e-160 | 443.0 | |
| Ftr17g00069 | . | 2 | 257 | 14-3-3 family | AT1G78300 | 80.545 | 6.27e-154 | 427.0 |