AGRP Logo

AGRP

Asteraceae Genomic Research Platform

Gene Search

Example:
Example:

Gene details

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Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Ftr4g03689 ATGGGGAATAAGCTGGGGAGGAGGAGACAGCTTGTTGATGAGAAGTATACGAGGCCTCAAGGGTTGTATCAACACAAAGATGTAGATCATAAGAAGCTTCGGAAGCTTATTCTTGATTCGAAGCTTGCTCCTTGTTATCCTGGAGATGATGATTGCAGTTGTGATCTTGAAGAATGCCCTATTTGCTTCTTGTATTATCCGAGTCTGAATAGATCAAGATGCTGCACGAAAGGCATTTGTACAGAGTGTTTTCTGCAGATGAAGACACCTAATTCCACACGGCCTACGCAATGTCCCTTTTGTAAAACTTTGAACTATGCTGTGGAGTATAGAGGCGTGAAAACTAAAGAGGAAAAGGGGCAGGAGCAAATTGAAGAACAGAGAGTGATAGAAGCAAAAATAAGAATGAGACAACAAGAAATTCAAGATGAAGAGGAACGAATGCTTAAAAGGCAAGAGACACATTCTTCAAGCAGGGTGTTCGAACCAAGTGAGGCTGAATATTTCTCCACGGCAGCATCGTCTTCTGAAGGTGAGGAAATAGTTTCTGCTCCAAATCCTGCAACAAATAGACATCCTCCACGCTATAGGGAGAGCAGAGATGATGAGTTTGATCTTGATCCGGAAAACATAATGCTCATGGAAGCCATCTGGTTGTCTTTTCAGGAGGATAACAAGCACAGACGCGGTAATCCTAACTACGGTGATGCCACCCAATTAGCAAAATACGCCACAGAAGTTCGCCTTTTAGCCTCCATGGCCCCACAAGCAGGGTATTCACCTTCATCATCATCACCTTCTGGTGGACTTGCATGCGCCATAGCCGCCCTCGCTGAGCGCCAGCAAACAGGAGGTGAATCGTCATCTAACTACAACAATTATAGCGGGAATCTATCAACATACAACGTGCATCCCAACCATAGCCAAACAGGGTTATTATCACTCGATAACCATCTGCAAATCGATCAGGATAATACAGAAGAATTTGGTGAATCTAGATTCCGGTATGATGGCAATTTGAGGACAACAGACGATAATGATGACGTAAGCAGAGGGCAGTATAGTCACATGATGAGGTGGAAAACAGTGGTTATGGTGGTGGCGGGAACATGGTTCCCGAGAGCTTTGAAGAGCAGATGA 1140 44.39 MGNKLGRRRQLVDEKYTRPQGLYQHKDVDHKKLRKLILDSKLAPCYPGDDDCSCDLEECPICFLYYPSLNRSRCCTKGICTECFLQMKTPNSTRPTQCPFCKTLNYAVEYRGVKTKEEKGQEQIEEQRVIEAKIRMRQQEIQDEEERMLKRQETHSSSRVFEPSEAEYFSTAASSSEGEEIVSAPNPATNRHPPRYRESRDDEFDLDPENIMLMEAIWLSFQEDNKHRRGNPNYGDATQLAKYATEVRLLASMAPQAGYSPSSSSPSGGLACAIAALAERQQTGGESSSNYNNYSGNLSTYNVHPNHSQTGLLSLDNHLQIDQDNTEEFGESRFRYDGNLRTTDDNDDVSRGQYSHMMRWKTVVMVVAGTWFPRALKSR 379
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Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Ftr4g03689 379 ProSiteProfiles Zinc finger RING-type profile. 59 102 IPR001841 -
Ftr4g03689 379 MobiDBLite consensus disorder prediction 161 183 - -
Ftr4g03689 379 MobiDBLite consensus disorder prediction 145 202 - -
Ftr4g03689 379 MobiDBLite consensus disorder prediction 145 160 - -
Ftr4g03689 379 PANTHER PROTEIN SIP5 1 321 IPR039301 GO:0005737(PANTHER)
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Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Ftr4g03689 - -
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Duplication type information

Select Gene1 Location1 Gene2 Location2 Duplicated-type
Ftr Ftr-Chr15:9596294 Ftr4g03689 Ftr-Chr4:120728499 wgd