Asteraceae Genomic Research Platform
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Ftr4g03694 | ATGTCGGAAGATGATCTACCTTATCACGTCAGAATCACCCCCTCCGGCGACTTGAAAACCGCCGGAAGATACGATTTCAACGGTCAATTGAGCTCGACCATGATCGCACACCCGAAGCTTGACCCTGTTTCCGGTGAGCTTTTCGCATTGAGTTACGATGTGATCCAAAAACCCTACCTGAAATACTTCCGATTCTCTCCCGACGGGAAGAAATCAAACGACGTAGCGATCGATTTGAAGATTCCGACGATGGTTCACGATTTCGCCATCACTGAGAACTTCGTGGTGGTGCCGGATCACCAGGTGGTGTTCAAGATGTCGGAGATGATCACCGGCGGATCGCCGGTGGTGTATGATAAAGAGAAAGTTTCACGATTTGGGGTTCTTGACAAATACGCAGAAAACGGGTCGGGTATAAAGTGGATCGAAGTACCCGATTGCTTCTGCTTTCACCTCTGGAACGCATGGGAAGAACCAGAGTCCGATGAAGTCGTCGTCATCGGATCTTGCATGACTCCGGCGGACTCCATTTTCAACGAAAGTGACCAAGAGTTAAAAAGCGTGTTATCGGAAATTCGCCTGAATTTAACCACCGGAAAATCCACCCGCCGGCGAATCATCTCGCCGGAGGAAGACGTCAATCTTGAAGCCGGAATGGTCAACAAGAATCTCCTCGGAAGAAAGTCAAAATTCGCTTATCTCGCCATTGCAGAACCATGGCCCAAGGTCTCTGGTTTCGCTAAAGTCGATCTTTCCACCGGAGAAACCAAAAAGTTCATCTACGGCGACAACAAGTACGGCGGCGAGCCTCTGTTTCTTCCCAATTCCACCACTAACGCCACCAGTACCACCGCCGAAGACGACGGTCATATACTGGCGTTTGTTCACGATGAATCCACATGGGAATCGGAGCTTCAGATCATCAACGCAATGACGATGGAATTATCGGCAACAGTGAAGCTACCATCGAGGGTTCCATATGGGTTTCACGGGACATTCATAAGCAGCAACGATTTAGCAACACAGGTGTGA | 1032 | 49.42 | MSEDDLPYHVRITPSGDLKTAGRYDFNGQLSSTMIAHPKLDPVSGELFALSYDVIQKPYLKYFRFSPDGKKSNDVAIDLKIPTMVHDFAITENFVVVPDHQVVFKMSEMITGGSPVVYDKEKVSRFGVLDKYAENGSGIKWIEVPDCFCFHLWNAWEEPESDEVVVIGSCMTPADSIFNESDQELKSVLSEIRLNLTTGKSTRRRIISPEEDVNLEAGMVNKNLLGRKSKFAYLAIAEPWPKVSGFAKVDLSTGETKKFIYGDNKYGGEPLFLPNSTTNATSTTAEDDGHILAFVHDESTWESELQIINAMTMELSATVKLPSRVPYGFHGTFISSNDLATQV | 343 |
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Ftr4g03694 | 343 | PANTHER | BETA-CAROTENE DIOXYGENASE | 1 | 335 | IPR004294 | GO:0009570(PANTHER)|GO:0010436(PANTHER)|GO:0016121(PANTHER)|GO:0016702(InterPro) | |
| Ftr4g03694 | 343 | Pfam | Retinal pigment epithelial membrane protein | 1 | 335 | IPR004294 | GO:0016702(InterPro) |
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Ftr4g03694 | K09840 | 9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51] |
| Select | Gene_1 | Gene_2 | Event_name |
|---|---|---|---|
| 98120 | Ftr4g03694 | Ftr8g00923 | |
| 98121 | Ftr4g03694 | Ftr9g01780 |
| Select | Gene1 | Location1 | Gene2 | Location2 | Duplicated-type |
|---|---|---|---|---|---|
| Ftr | Ftr-Chr4:120832182 | Ftr6g00365 | Ftr-Chr6:5744573 | dispersed | |
| Ftr | Ftr-Chr15:9271622 | Ftr4g03694 | Ftr-Chr4:120832182 | wgd | |
| Ftr | Ftr-Chr4:120832182 | Ftr8g00923 | Ftr-Chr8:11468487 | wgd | |
| Ftr | Ftr-Chr4:120832182 | Ftr9g01780 | Ftr-Chr9:76761997 | wgd |